Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC18.03■□□□□ 0.48
UPF2Q9HAU5 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 RPSAP43-201ENST00000402237 625 ntBASIC18.02■□□□□ 0.48
UPF2Q9HAU5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 UPF3AP3-201ENST00000420996 769 ntBASIC18.02■□□□□ 0.48
UPF2Q9HAU5 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 RARRES2P5-201ENST00000564013 466 ntBASIC18.02■□□□□ 0.48
UPF2Q9HAU5 SNHG9-202ENST00000564014 471 ntBASIC18.02■□□□□ 0.48
UPF2Q9HAU5 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
UPF2Q9HAU5 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
UPF2Q9HAU5 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UPF2Q9HAU5 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UPF2Q9HAU5 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UPF2Q9HAU5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
UPF2Q9HAU5 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UPF2Q9HAU5 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UPF2Q9HAU5 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UPF2Q9HAU5 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 AL591122.2-201ENST00000624125 1853 ntBASIC18.01■□□□□ 0.47
UPF2Q9HAU5 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 AC100757.3-201ENST00000622361 1406 ntBASIC18.01■□□□□ 0.47
UPF2Q9HAU5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.01■□□□□ 0.47
UPF2Q9HAU5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms