Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPAP1Q9BWH6 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPAP1Q9BWH6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.67■□□□□ 0.42
RPAP1Q9BWH6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RPAP1Q9BWH6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPAP1Q9BWH6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPAP1Q9BWH6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPAP1Q9BWH6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 AC253536.4-201ENST00000440539 267 ntBASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 AC006453.1-201ENST00000636037 1257 ntBASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPAP1Q9BWH6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 MBLAC2-202ENST00000514906 1936 ntBASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 AC015656.1-201ENST00000624209 3578 ntBASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 CICP12-201ENST00000455801 843 ntBASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 AC019193.1-201ENST00000506678 823 ntBASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 AC027601.3-201ENST00000622907 509 ntBASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 AL353726.2-201ENST00000623259 884 ntBASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 BEND3P1-201ENST00000421591 1944 ntBASIC17.65■□□□□ 0.42
RPAP1Q9BWH6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RPAP1Q9BWH6 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPAP1Q9BWH6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms