Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 KRT18P28-201ENST00000453838 1332 ntBASIC11.18□□□□□ -0.62
VGLL1Q99990 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
VGLL1Q99990 LSM5-207ENST00000410044 687 ntTSL 3 BASIC11.18□□□□□ -0.62
VGLL1Q99990 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.18□□□□□ -0.62
VGLL1Q99990 AC007969.1-201ENST00000433675 447 ntBASIC11.18□□□□□ -0.62
VGLL1Q99990 METTL21AP1-201ENST00000438852 635 ntBASIC11.18□□□□□ -0.62
VGLL1Q99990 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.18□□□□□ -0.62
VGLL1Q99990 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 AC004890.2-204ENST00000481968 304 ntBASIC11.18□□□□□ -0.62
VGLL1Q99990 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 AC120045.2-201ENST00000567334 178 ntBASIC11.18□□□□□ -0.62
VGLL1Q99990 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.18□□□□□ -0.62
VGLL1Q99990 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 BRI3BPP1-201ENST00000594224 787 ntBASIC11.18□□□□□ -0.62
VGLL1Q99990 AC092364.2-202ENST00000597012 1073 ntBASIC11.18□□□□□ -0.62
VGLL1Q99990 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.18□□□□□ -0.62
VGLL1Q99990 AC007431.3-201ENST00000623221 587 ntBASIC11.18□□□□□ -0.62
VGLL1Q99990 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 INTS4P2-202ENST00000614726 2019 ntBASIC11.18□□□□□ -0.62
VGLL1Q99990 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 DMBT1P1-203ENST00000636837 4628 ntBASIC11.17□□□□□ -0.62
VGLL1Q99990 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 SPDYE19P-201ENST00000338590 713 ntBASIC11.17□□□□□ -0.62
VGLL1Q99990 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
VGLL1Q99990 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.17□□□□□ -0.62
VGLL1Q99990 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 AC134915.1-201ENST00000426461 574 ntBASIC11.17□□□□□ -0.62
VGLL1Q99990 AC055876.3-201ENST00000431496 288 ntBASIC11.17□□□□□ -0.62
VGLL1Q99990 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
VGLL1Q99990 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.17□□□□□ -0.62
VGLL1Q99990 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
VGLL1Q99990 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.17□□□□□ -0.62
VGLL1Q99990 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms