Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.25□□□□□ -0.13
PKP4Q99569 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
PKP4Q99569 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PKP4Q99569 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.25□□□□□ -0.13
PKP4Q99569 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PKP4Q99569 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PKP4Q99569 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PKP4Q99569 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.25□□□□□ -0.13
PKP4Q99569 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PKP4Q99569 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
PKP4Q99569 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.25□□□□□ -0.13
PKP4Q99569 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.25□□□□□ -0.13
PKP4Q99569 RPL13AP20-201ENST00000459725 609 ntBASIC14.25□□□□□ -0.13
PKP4Q99569 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.25□□□□□ -0.13
PKP4Q99569 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.25□□□□□ -0.13
PKP4Q99569 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
PKP4Q99569 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.25□□□□□ -0.13
PKP4Q99569 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.25□□□□□ -0.13
PKP4Q99569 RN7SL560P-201ENST00000577943 264 ntBASIC14.25□□□□□ -0.13
PKP4Q99569 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.25□□□□□ -0.13
PKP4Q99569 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.25□□□□□ -0.13
PKP4Q99569 AC244394.1-201ENST00000435000 1665 ntBASIC14.25□□□□□ -0.13
PKP4Q99569 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.25□□□□□ -0.13
PKP4Q99569 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.25□□□□□ -0.13
PKP4Q99569 HSPA7-201ENST00000445535 1927 ntBASIC14.25□□□□□ -0.13
PKP4Q99569 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.25□□□□□ -0.13
PKP4Q99569 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PKP4Q99569 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.25□□□□□ -0.13
PKP4Q99569 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.25□□□□□ -0.13
PKP4Q99569 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKP4Q99569 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PKP4Q99569 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.24□□□□□ -0.13
PKP4Q99569 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.24□□□□□ -0.13
PKP4Q99569 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.24□□□□□ -0.13
PKP4Q99569 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.24□□□□□ -0.13
PKP4Q99569 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.24□□□□□ -0.13
PKP4Q99569 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.24□□□□□ -0.13
PKP4Q99569 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PKP4Q99569 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.24□□□□□ -0.13
PKP4Q99569 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.24□□□□□ -0.13
PKP4Q99569 KLF2P1-201ENST00000447438 1042 ntBASIC14.24□□□□□ -0.13
PKP4Q99569 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.24□□□□□ -0.13
PKP4Q99569 RPSAP36-202ENST00000494591 1261 ntBASIC14.24□□□□□ -0.13
PKP4Q99569 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.24□□□□□ -0.13
PKP4Q99569 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.24□□□□□ -0.13
PKP4Q99569 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.24□□□□□ -0.13
PKP4Q99569 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.24□□□□□ -0.13
PKP4Q99569 AC027237.1-201ENST00000560942 655 ntBASIC14.24□□□□□ -0.13
PKP4Q99569 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PKP4Q99569 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.24□□□□□ -0.13
PKP4Q99569 AL359881.2-201ENST00000602973 570 ntBASIC14.24□□□□□ -0.13
PKP4Q99569 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.24□□□□□ -0.13
PKP4Q99569 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PKP4Q99569 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.24□□□□□ -0.13
PKP4Q99569 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.24□□□□□ -0.13
PKP4Q99569 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PKP4Q99569 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.24□□□□□ -0.13
PKP4Q99569 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKP4Q99569 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PKP4Q99569 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.24□□□□□ -0.13
PKP4Q99569 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PKP4Q99569 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.23□□□□□ -0.13
PKP4Q99569 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.23□□□□□ -0.13
PKP4Q99569 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.23□□□□□ -0.13
PKP4Q99569 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.23□□□□□ -0.13
PKP4Q99569 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PKP4Q99569 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms