Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 C8orf49-201ENST00000525043 1968 ntBASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 Z98259.2-201ENST00000641583 609 ntBASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PDLIM5Q96HC4 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 ANKRD19P-201ENST00000338192 862 ntBASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 MIR1909-201ENST00000411312 80 ntBASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 AC012441.2-201ENST00000444843 739 ntBASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 RBM8B-201ENST00000555532 525 ntBASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 AC009884.2-201ENST00000603110 324 ntBASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 AL162426.1-201ENST00000624141 743 ntBASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 MBLAC2-202ENST00000514906 1936 ntBASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDLIM5Q96HC4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms