Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDCA5Q96FF9 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDCA5Q96FF9 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDCA5Q96FF9 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC16.77■□□□□ 0.28
CDCA5Q96FF9 AC025186.1-201ENST00000478174 870 ntBASIC16.77■□□□□ 0.28
CDCA5Q96FF9 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CDCA5Q96FF9 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDCA5Q96FF9 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.77■□□□□ 0.28
CDCA5Q96FF9 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC16.77■□□□□ 0.28
CDCA5Q96FF9 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC16.77■□□□□ 0.28
CDCA5Q96FF9 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.77■□□□□ 0.28
CDCA5Q96FF9 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC16.77■□□□□ 0.28
CDCA5Q96FF9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDCA5Q96FF9 CCT8L1P-201ENST00000465400 1674 ntBASIC16.77■□□□□ 0.28
CDCA5Q96FF9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.77■□□□□ 0.27
CDCA5Q96FF9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.77■□□□□ 0.27
CDCA5Q96FF9 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDCA5Q96FF9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDCA5Q96FF9 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.77■□□□□ 0.27
CDCA5Q96FF9 AC026691.1-201ENST00000602502 2017 ntBASIC16.77■□□□□ 0.27
CDCA5Q96FF9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDCA5Q96FF9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDCA5Q96FF9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.77■□□□□ 0.27
CDCA5Q96FF9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDCA5Q96FF9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
CDCA5Q96FF9 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CDCA5Q96FF9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 AC004522.1-201ENST00000419978 654 ntBASIC16.76■□□□□ 0.27
CDCA5Q96FF9 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 STK24P1-201ENST00000455035 1291 ntBASIC16.76■□□□□ 0.27
CDCA5Q96FF9 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 RN7SL147P-201ENST00000487345 298 ntBASIC16.76■□□□□ 0.27
CDCA5Q96FF9 AC100858.1-201ENST00000514059 1228 ntBASIC16.76■□□□□ 0.27
CDCA5Q96FF9 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 AL590235.1-201ENST00000564650 861 ntBASIC16.76■□□□□ 0.27
CDCA5Q96FF9 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDCA5Q96FF9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 LINC00115-201ENST00000473798 1317 ntBASIC16.75■□□□□ 0.27
CDCA5Q96FF9 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 AL080243.1-201ENST00000423293 1060 ntBASIC16.75■□□□□ 0.27
CDCA5Q96FF9 AL161932.2-201ENST00000435436 679 ntBASIC16.75■□□□□ 0.27
CDCA5Q96FF9 KRT18P62-201ENST00000446618 1287 ntBASIC16.75■□□□□ 0.27
CDCA5Q96FF9 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.75■□□□□ 0.27
CDCA5Q96FF9 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC16.75■□□□□ 0.27
CDCA5Q96FF9 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.75■□□□□ 0.27
CDCA5Q96FF9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms