Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NMD3Q96D46 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NMD3Q96D46 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NMD3Q96D46 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NMD3Q96D46 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.96□□□□□ -0.17
NMD3Q96D46 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.96□□□□□ -0.17
NMD3Q96D46 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.96□□□□□ -0.17
NMD3Q96D46 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.96□□□□□ -0.17
NMD3Q96D46 AL512361.1-201ENST00000554200 418 ntBASIC13.96□□□□□ -0.17
NMD3Q96D46 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.96□□□□□ -0.17
NMD3Q96D46 AC025678.2-201ENST00000562061 970 ntBASIC13.96□□□□□ -0.17
NMD3Q96D46 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.96□□□□□ -0.17
NMD3Q96D46 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.96□□□□□ -0.17
NMD3Q96D46 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NMD3Q96D46 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.96□□□□□ -0.17
NMD3Q96D46 AL138828.2-201ENST00000615812 383 ntBASIC13.96□□□□□ -0.17
NMD3Q96D46 MIR6069-201ENST00000620069 79 ntBASIC13.96□□□□□ -0.17
NMD3Q96D46 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.96□□□□□ -0.17
NMD3Q96D46 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NMD3Q96D46 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NMD3Q96D46 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NMD3Q96D46 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
NMD3Q96D46 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NMD3Q96D46 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.96□□□□□ -0.18
NMD3Q96D46 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NMD3Q96D46 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NMD3Q96D46 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NMD3Q96D46 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NMD3Q96D46 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NMD3Q96D46 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
NMD3Q96D46 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NMD3Q96D46 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NMD3Q96D46 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.95□□□□□ -0.18
NMD3Q96D46 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.95□□□□□ -0.18
NMD3Q96D46 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
NMD3Q96D46 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13.95□□□□□ -0.18
NMD3Q96D46 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.95□□□□□ -0.18
NMD3Q96D46 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NMD3Q96D46 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
NMD3Q96D46 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.95□□□□□ -0.18
NMD3Q96D46 RPL5P21-201ENST00000404620 815 ntBASIC13.95□□□□□ -0.18
NMD3Q96D46 KLF2P3-201ENST00000451977 1087 ntBASIC13.95□□□□□ -0.18
NMD3Q96D46 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.95□□□□□ -0.18
NMD3Q96D46 SERBP1P3-201ENST00000459980 809 ntBASIC13.95□□□□□ -0.18
NMD3Q96D46 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.95□□□□□ -0.18
NMD3Q96D46 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.95□□□□□ -0.18
NMD3Q96D46 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.95□□□□□ -0.18
NMD3Q96D46 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NMD3Q96D46 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.95□□□□□ -0.18
NMD3Q96D46 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.95□□□□□ -0.18
NMD3Q96D46 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.95□□□□□ -0.18
NMD3Q96D46 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.95□□□□□ -0.18
NMD3Q96D46 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.95□□□□□ -0.18
NMD3Q96D46 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.95□□□□□ -0.18
NMD3Q96D46 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.95□□□□□ -0.18
NMD3Q96D46 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.95□□□□□ -0.18
NMD3Q96D46 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NMD3Q96D46 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.95□□□□□ -0.18
NMD3Q96D46 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.95□□□□□ -0.18
NMD3Q96D46 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
NMD3Q96D46 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NMD3Q96D46 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.95□□□□□ -0.18
NMD3Q96D46 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NMD3Q96D46 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NMD3Q96D46 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NMD3Q96D46 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NMD3Q96D46 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NMD3Q96D46 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.94□□□□□ -0.18
NMD3Q96D46 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.94□□□□□ -0.18
NMD3Q96D46 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NMD3Q96D46 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.94□□□□□ -0.18
NMD3Q96D46 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.94□□□□□ -0.18
NMD3Q96D46 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NMD3Q96D46 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.94□□□□□ -0.18
NMD3Q96D46 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NMD3Q96D46 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.94□□□□□ -0.18
NMD3Q96D46 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NMD3Q96D46 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.94□□□□□ -0.18
NMD3Q96D46 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms