Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 KHSRPP1-201ENST00000427983 1768 ntBASIC12.99□□□□□ -0.33
APH1AQ96BI3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 AL008718.2-201ENST00000609206 1313 ntBASIC12.99□□□□□ -0.33
APH1AQ96BI3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.99□□□□□ -0.33
APH1AQ96BI3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 AC006033.1-201ENST00000440505 426 ntBASIC12.99□□□□□ -0.33
APH1AQ96BI3 AC004898.1-201ENST00000451057 766 ntBASIC12.99□□□□□ -0.33
APH1AQ96BI3 RNMTL1P1-201ENST00000454103 560 ntBASIC12.99□□□□□ -0.33
APH1AQ96BI3 AP001258.2-201ENST00000529891 490 ntBASIC12.99□□□□□ -0.33
APH1AQ96BI3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 AC006504.5-208ENST00000588784 2401 ntBASIC12.99□□□□□ -0.33
APH1AQ96BI3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APH1AQ96BI3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.99□□□□□ -0.33
APH1AQ96BI3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 AC106881.1-201ENST00000605849 3329 ntBASIC12.98□□□□□ -0.33
APH1AQ96BI3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.98□□□□□ -0.33
APH1AQ96BI3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 TPT1P11-201ENST00000458482 498 ntBASIC12.98□□□□□ -0.33
APH1AQ96BI3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 MIR4525-201ENST00000580000 75 ntBASIC12.98□□□□□ -0.33
APH1AQ96BI3 MIR4783-201ENST00000580343 82 ntBASIC12.98□□□□□ -0.33
APH1AQ96BI3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APH1AQ96BI3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
APH1AQ96BI3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms