Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CKAP2Q8WWK9 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 AL928654.5-201ENST00000624831 2501 ntBASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 AL359845.1-201ENST00000458202 1648 ntBASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 AP001059.3-201ENST00000619053 235 ntBASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 AC009093.7-201ENST00000623853 1223 ntBASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 AL138725.1-201ENST00000407347 1314 ntBASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CKAP2Q8WWK9 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 AL031719.1-201ENST00000623365 2587 ntBASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 RPSAP43-201ENST00000402237 625 ntBASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 AC044860.1-202ENST00000559481 777 ntBASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 AL603764.1-201ENST00000636452 321 ntBASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 AC064801.2-201ENST00000625052 1303 ntBASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CKAP2Q8WWK9 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms