Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 POP5-201ENST00000341039 913 ntTSL 2 BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 THAP4-203ENST00000402545 833 ntTSL 5 BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 OR7E155P-201ENST00000412208 1014 ntBASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 HMGA1P2-201ENST00000430198 324 ntBASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 AC112220.4-201ENST00000604982 1263 ntBASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 AC138627.1-201ENST00000641127 1257 ntBASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF40Q8TER5 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 OR7E12P-201ENST00000344740 973 ntBASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 CDC37P2-201ENST00000562287 1029 ntBASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 AC022001.3-201ENST00000606330 596 ntBASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ARHGEF40Q8TER5 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 ASS1P1-201ENST00000402854 1237 ntBASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF40Q8TER5 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 CD37-203ENST00000426897 1204 ntTSL 2 BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 CD81-209ENST00000492627 886 ntTSL 3 BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF40Q8TER5 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms