Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLHC1Q8NHS4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLHC1Q8NHS4 AC107918.4-201ENST00000641966 3141 ntBASIC14.12□□□□□ -0.15
CLHC1Q8NHS4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CLHC1Q8NHS4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLHC1Q8NHS4 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLHC1Q8NHS4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 POM121L8P-201ENST00000417732 1281 ntBASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 POM121L9P-203ENST00000441984 1285 ntBASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 AL391280.1-201ENST00000506969 1062 ntBASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 MIR4745-201ENST00000577608 62 ntBASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 AL359881.3-201ENST00000602640 1721 ntBASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 AC009093.2-202ENST00000620513 2079 ntBASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 MBLAC2-202ENST00000514906 1936 ntBASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 FKBP4P6-201ENST00000457486 1332 ntBASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 AC134312.5-201ENST00000568031 1313 ntBASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLHC1Q8NHS4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 TDH-203ENST00000531764 1110 ntBASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 AC138466.3-201ENST00000619983 221 ntBASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 ENPP7P14-201ENST00000621765 1040 ntBASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 RPSAP52-203ENST00000622976 1023 ntBASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.1□□□□□ -0.15
CLHC1Q8NHS4 AL031595.1-201ENST00000623969 4709 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 307.3 ms