Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 AC092135.3-201ENST00000624151 1846 ntBASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDND2Q8NHS1 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 AL354877.1-201ENST00000424412 413 ntBASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 ACTG1P17-201ENST00000558391 1119 ntBASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 AC005730.2-201ENST00000564549 1184 ntBASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 MIR4683-201ENST00000579659 81 ntBASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 AP000593.2-201ENST00000542775 1433 ntBASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
CLDND2Q8NHS1 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms