Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 AL161932.2-201ENST00000435436 679 ntBASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 AC005730.2-201ENST00000564549 1184 ntBASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 AC104982.3-201ENST00000581995 514 ntBASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 AC104506.1-201ENST00000609247 429 ntBASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 AC091271.1-201ENST00000611877 1162 ntBASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 AC027601.5-201ENST00000624065 2482 ntBASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
FAM90A1Q86YD7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 RN7SL219P-201ENST00000582872 296 ntBASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 AC009884.2-201ENST00000603110 324 ntBASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 AC138969.2-201ENST00000532739 9932 ntBASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.28□□□□□ -0.44
FAM90A1Q86YD7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms