Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 SNORA57-201ENST00000383870 149 ntBASIC17.94■□□□□ 0.46
COL23A1Q86Y22 EEF1DP5-201ENST00000431410 772 ntBASIC17.94■□□□□ 0.46
COL23A1Q86Y22 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 SRP14-208ENST00000560773 468 ntTSL 3 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 AC120498.7-201ENST00000562876 330 ntBASIC17.94■□□□□ 0.46
COL23A1Q86Y22 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 URAHP-205ENST00000610227 398 ntBASIC17.94■□□□□ 0.46
COL23A1Q86Y22 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
COL23A1Q86Y22 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 CCT8L1P-201ENST00000465400 1674 ntBASIC17.93■□□□□ 0.46
COL23A1Q86Y22 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 AC022080.1-201ENST00000366255 781 ntBASIC17.93■□□□□ 0.46
COL23A1Q86Y22 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 AC136604.1-202ENST00000425471 771 ntBASIC17.93■□□□□ 0.46
COL23A1Q86Y22 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 RHOQP2-201ENST00000449922 579 ntBASIC17.93■□□□□ 0.46
COL23A1Q86Y22 GPX3-202ENST00000517973 612 ntTSL 3 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 AC080013.5-201ENST00000607044 679 ntBASIC17.93■□□□□ 0.46
COL23A1Q86Y22 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 LINC00115-201ENST00000473798 1317 ntBASIC17.93■□□□□ 0.46
COL23A1Q86Y22 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COL23A1Q86Y22 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL23A1Q86Y22 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms