Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.56□□□□□ -0.24
VRK2Q86Y07 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VRK2Q86Y07 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 AL512384.1-201ENST00000406683 331 ntBASIC13.55□□□□□ -0.24
VRK2Q86Y07 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 AP005018.1-201ENST00000525475 301 ntBASIC13.55□□□□□ -0.24
VRK2Q86Y07 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 AC078819.1-201ENST00000547454 765 ntBASIC13.55□□□□□ -0.24
VRK2Q86Y07 AC012085.1-201ENST00000548270 765 ntBASIC13.55□□□□□ -0.24
VRK2Q86Y07 AL596325.1-201ENST00000563991 1082 ntBASIC13.55□□□□□ -0.24
VRK2Q86Y07 AL022328.1-201ENST00000610050 478 ntBASIC13.55□□□□□ -0.24
VRK2Q86Y07 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 KRT8P28-201ENST00000433288 1390 ntBASIC13.55□□□□□ -0.24
VRK2Q86Y07 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 AC089987.1-201ENST00000551654 2209 ntBASIC13.55□□□□□ -0.24
VRK2Q86Y07 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.55□□□□□ -0.24
VRK2Q86Y07 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VRK2Q86Y07 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 AL354989.2-201ENST00000435838 1540 ntBASIC13.54□□□□□ -0.24
VRK2Q86Y07 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 AC016694.1-201ENST00000434179 700 ntBASIC13.54□□□□□ -0.24
VRK2Q86Y07 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 BTNL10-201ENST00000595971 695 ntBASIC13.54□□□□□ -0.24
VRK2Q86Y07 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 AC138951.2-201ENST00000623455 1161 ntBASIC13.54□□□□□ -0.24
VRK2Q86Y07 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
VRK2Q86Y07 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.54□□□□□ -0.24
VRK2Q86Y07 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms