Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 BRWD1P1-201ENST00000401091 371 ntBASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 KRT8P24-201ENST00000560290 1559 ntBASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 SNORD3B-2-202ENST00000571722 791 ntBASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 AC090164.2-201ENST00000611487 516 ntBASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.67■□□□□ 0.42
TTC41PQ6P2S7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 AC078875.1-201ENST00000431907 724 ntBASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 ACTBP11-201ENST00000436287 1126 ntBASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 PFN1P12-201ENST00000455938 534 ntBASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 AL591471.1-201ENST00000621855 229 ntBASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC41PQ6P2S7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 AC004898.1-201ENST00000451057 766 ntBASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 AC104306.2-201ENST00000451877 341 ntBASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 AC108725.1-201ENST00000495472 409 ntBASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 AC106794.1-201ENST00000506935 792 ntBASIC17.65■□□□□ 0.42
TTC41PQ6P2S7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms