Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 PUDPP3-201ENST00000445368 636 ntBASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 MIR5572-201ENST00000583188 137 ntBASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 AC005695.3-201ENST00000614522 232 ntBASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 AP001002.3-201ENST00000623482 206 ntBASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 KRT8P4-201ENST00000509735 1454 ntBASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
HERC4Q5GLZ8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
HERC4Q5GLZ8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.39■□□□□ 0.22
HERC4Q5GLZ8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 HIST2H2BC-201ENST00000498492 580 ntBASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 CHMP4BP1-201ENST00000556017 588 ntBASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 AC103988.2-201ENST00000561804 725 ntBASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 AC138627.1-207ENST00000641560 1006 ntBASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 AC139712.1-201ENST00000378256 1875 ntBASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HERC4Q5GLZ8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 SBF1P1-201ENST00000444527 5631 ntBASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.38■□□□□ 0.21
HERC4Q5GLZ8 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms