Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.03■□□□□ -0
ALFQ53S48 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.03■□□□□ -0
ALFQ53S48 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ALFQ53S48 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ALFQ53S48 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.03■□□□□ -0
ALFQ53S48 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.03■□□□□ -0
ALFQ53S48 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.03■□□□□ -0
ALFQ53S48 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.03■□□□□ -0
ALFQ53S48 AC006122.1-201ENST00000493323 440 ntBASIC15.03■□□□□ -0
ALFQ53S48 HLA-J-204ENST00000495278 958 ntBASIC15.03■□□□□ -0
ALFQ53S48 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.03■□□□□ -0
ALFQ53S48 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.03■□□□□ -0
ALFQ53S48 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.03■□□□□ -0
ALFQ53S48 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.03■□□□□ -0
ALFQ53S48 RBM8B-201ENST00000555532 525 ntBASIC15.03■□□□□ -0
ALFQ53S48 MIR3615-201ENST00000581999 87 ntBASIC15.03■□□□□ -0
ALFQ53S48 RN7SL163P-201ENST00000583100 276 ntBASIC15.03■□□□□ -0
ALFQ53S48 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.03■□□□□ -0
ALFQ53S48 AC244093.1-201ENST00000610837 814 ntBASIC15.03■□□□□ -0
ALFQ53S48 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
ALFQ53S48 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.03■□□□□ -0
ALFQ53S48 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ALFQ53S48 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
ALFQ53S48 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.03■□□□□ -0
ALFQ53S48 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
ALFQ53S48 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.02■□□□□ -0
ALFQ53S48 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ALFQ53S48 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.02■□□□□ -0
ALFQ53S48 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
ALFQ53S48 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.02■□□□□ -0
ALFQ53S48 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ALFQ53S48 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
ALFQ53S48 AC011498.7-201ENST00000624986 2027 ntBASIC15.02■□□□□ -0
ALFQ53S48 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
ALFQ53S48 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ALFQ53S48 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.02■□□□□ -0
ALFQ53S48 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ALFQ53S48 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.02■□□□□ -0
ALFQ53S48 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ALFQ53S48 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ALFQ53S48 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.02■□□□□ -0
ALFQ53S48 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
ALFQ53S48 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.02■□□□□ -0
ALFQ53S48 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.02■□□□□ -0
ALFQ53S48 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ALFQ53S48 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.02■□□□□ -0
ALFQ53S48 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ALFQ53S48 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.02■□□□□ -0
ALFQ53S48 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.02■□□□□ -0
ALFQ53S48 SORD2P-201ENST00000558556 1069 ntBASIC15.02■□□□□ -0
ALFQ53S48 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.02■□□□□ -0
ALFQ53S48 AC090164.2-201ENST00000611487 516 ntBASIC15.02■□□□□ -0
ALFQ53S48 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.02■□□□□ -0
ALFQ53S48 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.02□□□□□ -0.01
ALFQ53S48 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ALFQ53S48 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
ALFQ53S48 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ALFQ53S48 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ALFQ53S48 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
ALFQ53S48 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ALFQ53S48 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
ALFQ53S48 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.02□□□□□ -0.01
ALFQ53S48 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ALFQ53S48 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
ALFQ53S48 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ALFQ53S48 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ALFQ53S48 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ALFQ53S48 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.02□□□□□ -0.01
ALFQ53S48 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ALFQ53S48 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ALFQ53S48 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ALFQ53S48 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.01□□□□□ -0.01
ALFQ53S48 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ALFQ53S48 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ALFQ53S48 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.01□□□□□ -0.01
ALFQ53S48 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ALFQ53S48 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.01□□□□□ -0.01
ALFQ53S48 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ALFQ53S48 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.01□□□□□ -0.01
ALFQ53S48 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ALFQ53S48 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ALFQ53S48 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.01□□□□□ -0.01
ALFQ53S48 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.01□□□□□ -0.01
ALFQ53S48 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.01□□□□□ -0.01
ALFQ53S48 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ALFQ53S48 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ALFQ53S48 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
ALFQ53S48 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms