Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC27Q2M243 AC016700.1-201ENST00000429424 312 ntBASIC18.89■□□□□ 0.61
CCDC27Q2M243 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 AC125604.1-201ENST00000496255 707 ntBASIC18.89■□□□□ 0.61
CCDC27Q2M243 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC27Q2M243 RN7SL219P-201ENST00000582872 296 ntBASIC18.89■□□□□ 0.61
CCDC27Q2M243 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC27Q2M243 AL645939.5-201ENST00000606834 243 ntBASIC18.89■□□□□ 0.61
CCDC27Q2M243 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC27Q2M243 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC27Q2M243 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC27Q2M243 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC27Q2M243 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 AC007952.5-201ENST00000572818 1486 ntBASIC18.89■□□□□ 0.61
CCDC27Q2M243 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC27Q2M243 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC27Q2M243 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC27Q2M243 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC27Q2M243 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 AC140658.4-201ENST00000561990 352 ntBASIC18.88■□□□□ 0.61
CCDC27Q2M243 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 SHMT1P1-201ENST00000419974 1312 ntBASIC18.88■□□□□ 0.61
CCDC27Q2M243 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC27Q2M243 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC27Q2M243 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC27Q2M243 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC27Q2M243 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC27Q2M243 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC27Q2M243 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms