Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CD47Q08722 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.66□□□□□ -0.22
CD47Q08722 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CD47Q08722 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.66□□□□□ -0.22
CD47Q08722 AL139385.1-201ENST00000611744 3272 ntBASIC13.66□□□□□ -0.22
CD47Q08722 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CD47Q08722 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 FAM86LP-201ENST00000478302 853 ntBASIC13.66□□□□□ -0.22
CD47Q08722 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.66□□□□□ -0.22
CD47Q08722 RNA5SP421-201ENST00000516864 134 ntBASIC13.66□□□□□ -0.22
CD47Q08722 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.66□□□□□ -0.22
CD47Q08722 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.66□□□□□ -0.22
CD47Q08722 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.66□□□□□ -0.22
CD47Q08722 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.66□□□□□ -0.22
CD47Q08722 RARRES2P5-201ENST00000564013 466 ntBASIC13.66□□□□□ -0.22
CD47Q08722 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.66□□□□□ -0.22
CD47Q08722 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CD47Q08722 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 HSPA8P5-201ENST00000456928 2069 ntBASIC13.66□□□□□ -0.22
CD47Q08722 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CD47Q08722 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.65□□□□□ -0.22
CD47Q08722 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.65□□□□□ -0.22
CD47Q08722 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CD47Q08722 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CD47Q08722 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 AC118758.2-201ENST00000614242 2813 ntBASIC13.65□□□□□ -0.22
CD47Q08722 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.65□□□□□ -0.22
CD47Q08722 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CD47Q08722 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.65□□□□□ -0.22
CD47Q08722 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.65□□□□□ -0.22
CD47Q08722 MRPS18AP1-201ENST00000414458 589 ntBASIC13.65□□□□□ -0.22
CD47Q08722 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.65□□□□□ -0.22
CD47Q08722 HLA-K-203ENST00000430151 1046 ntBASIC13.65□□□□□ -0.22
CD47Q08722 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.65□□□□□ -0.22
CD47Q08722 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.65□□□□□ -0.22
CD47Q08722 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.65□□□□□ -0.22
CD47Q08722 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.65□□□□□ -0.22
CD47Q08722 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.65□□□□□ -0.22
CD47Q08722 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.65□□□□□ -0.22
CD47Q08722 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.65□□□□□ -0.22
CD47Q08722 AC023310.3-201ENST00000557027 670 ntBASIC13.65□□□□□ -0.22
CD47Q08722 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.65□□□□□ -0.22
CD47Q08722 AC100756.1-201ENST00000562736 682 ntBASIC13.65□□□□□ -0.22
CD47Q08722 AC138749.3-201ENST00000567691 622 ntBASIC13.65□□□□□ -0.22
CD47Q08722 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.65□□□□□ -0.22
CD47Q08722 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.65□□□□□ -0.22
CD47Q08722 AL049840.4-201ENST00000602422 811 ntBASIC13.65□□□□□ -0.22
CD47Q08722 AC116165.1-201ENST00000611806 668 ntBASIC13.65□□□□□ -0.22
CD47Q08722 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.65□□□□□ -0.22
CD47Q08722 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CD47Q08722 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.65□□□□□ -0.22
CD47Q08722 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CD47Q08722 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.65□□□□□ -0.22
CD47Q08722 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.65□□□□□ -0.22
CD47Q08722 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.65□□□□□ -0.22
CD47Q08722 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.65□□□□□ -0.22
CD47Q08722 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CD47Q08722 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CD47Q08722 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
CD47Q08722 AL118506.1-201ENST00000601296 3082 ntBASIC13.65□□□□□ -0.23
CD47Q08722 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
CD47Q08722 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.23
CD47Q08722 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CD47Q08722 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CD47Q08722 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.64□□□□□ -0.23
CD47Q08722 AC215219.1-201ENST00000400706 1817 ntBASIC13.64□□□□□ -0.23
CD47Q08722 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.64□□□□□ -0.23
CD47Q08722 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.64□□□□□ -0.23
CD47Q08722 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CD47Q08722 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms