Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRNB3Q05901 AC008761.3-201ENST00000624803 892 ntBASIC13.94□□□□□ -0.18
CHRNB3Q05901 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.94□□□□□ -0.18
CHRNB3Q05901 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRNB3Q05901 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.94□□□□□ -0.18
CHRNB3Q05901 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRNB3Q05901 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRNB3Q05901 AC015909.5-201ENST00000624336 2266 ntBASIC13.94□□□□□ -0.18
CHRNB3Q05901 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CHRNB3Q05901 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRNB3Q05901 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CHRNB3Q05901 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CHRNB3Q05901 AL356585.2-201ENST00000625078 2396 ntBASIC13.94□□□□□ -0.18
CHRNB3Q05901 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRNB3Q05901 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CHRNB3Q05901 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.94□□□□□ -0.18
CHRNB3Q05901 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.94□□□□□ -0.18
CHRNB3Q05901 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 AC090643.2-201ENST00000623442 2029 ntBASIC13.93□□□□□ -0.18
CHRNB3Q05901 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 FP325330.2-201ENST00000624219 5630 ntBASIC13.93□□□□□ -0.18
CHRNB3Q05901 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 AC010336.2-201ENST00000564226 506 ntBASIC13.93□□□□□ -0.18
CHRNB3Q05901 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.93□□□□□ -0.18
CHRNB3Q05901 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHRNB3Q05901 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CHRNB3Q05901 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 AC022144.1-201ENST00000602255 1580 ntBASIC13.92□□□□□ -0.18
CHRNB3Q05901 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 MIR497HG-202ENST00000572453 3838 ntBASIC13.92□□□□□ -0.18
CHRNB3Q05901 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 AC004890.2-204ENST00000481968 304 ntBASIC13.92□□□□□ -0.18
CHRNB3Q05901 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHRNB3Q05901 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.92□□□□□ -0.18
CHRNB3Q05901 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms