Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.35■□□□□ 0.05
IRX4P78413 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 AL138709.1-201ENST00000614840 1693 ntBASIC15.35■□□□□ 0.05
IRX4P78413 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.35■□□□□ 0.05
IRX4P78413 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.35■□□□□ 0.05
IRX4P78413 RNA5SP486-201ENST00000515961 83 ntBASIC15.35■□□□□ 0.05
IRX4P78413 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.35■□□□□ 0.05
IRX4P78413 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.35■□□□□ 0.05
IRX4P78413 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.35■□□□□ 0.05
IRX4P78413 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.35■□□□□ 0.05
IRX4P78413 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.35■□□□□ 0.05
IRX4P78413 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 BEND3P1-201ENST00000421591 1944 ntBASIC15.35■□□□□ 0.05
IRX4P78413 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.35■□□□□ 0.05
IRX4P78413 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.35■□□□□ 0.05
IRX4P78413 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IRX4P78413 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
IRX4P78413 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.34■□□□□ 0.05
IRX4P78413 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
IRX4P78413 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.34■□□□□ 0.05
IRX4P78413 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
IRX4P78413 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.34■□□□□ 0.05
IRX4P78413 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
IRX4P78413 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
IRX4P78413 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.34■□□□□ 0.05
IRX4P78413 NUS1P3-201ENST00000423502 862 ntBASIC15.34■□□□□ 0.05
IRX4P78413 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.34■□□□□ 0.05
IRX4P78413 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.34■□□□□ 0.05
IRX4P78413 MPRIPP1-201ENST00000452433 1089 ntBASIC15.34■□□□□ 0.05
IRX4P78413 AL590640.2-201ENST00000457038 527 ntBASIC15.34■□□□□ 0.05
IRX4P78413 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.34■□□□□ 0.05
IRX4P78413 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.34■□□□□ 0.05
IRX4P78413 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.34■□□□□ 0.05
IRX4P78413 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.34■□□□□ 0.05
IRX4P78413 EEF1DP1-201ENST00000585891 896 ntBASIC15.34■□□□□ 0.05
IRX4P78413 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.34■□□□□ 0.05
IRX4P78413 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.34■□□□□ 0.05
IRX4P78413 AL096828.3-201ENST00000615354 462 ntBASIC15.34■□□□□ 0.05
IRX4P78413 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
IRX4P78413 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.34■□□□□ 0.05
IRX4P78413 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.34■□□□□ 0.05
IRX4P78413 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.34■□□□□ 0.05
IRX4P78413 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
IRX4P78413 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.34■□□□□ 0.05
IRX4P78413 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.34■□□□□ 0.05
IRX4P78413 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IRX4P78413 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
IRX4P78413 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
IRX4P78413 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.34■□□□□ 0.05
IRX4P78413 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.34■□□□□ 0.05
IRX4P78413 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms