Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.44□□□□□ -0.26
CDC42P60953 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 AC072061.1-201ENST00000569710 2234 ntBASIC13.44□□□□□ -0.26
CDC42P60953 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42P60953 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CDC42P60953 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CDC42P60953 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CDC42P60953 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 AC003102.2-201ENST00000589195 1469 ntBASIC13.44□□□□□ -0.26
CDC42P60953 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42P60953 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.44□□□□□ -0.26
CDC42P60953 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42P60953 AC069262.1-201ENST00000539058 672 ntBASIC13.44□□□□□ -0.26
CDC42P60953 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 AC093813.1-201ENST00000605066 256 ntBASIC13.44□□□□□ -0.26
CDC42P60953 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
CDC42P60953 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.44□□□□□ -0.26
CDC42P60953 BX539320.1-201ENST00000623759 877 ntBASIC13.44□□□□□ -0.26
CDC42P60953 AC073592.8-201ENST00000624126 511 ntBASIC13.44□□□□□ -0.26
CDC42P60953 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42P60953 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42P60953 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDC42P60953 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.44□□□□□ -0.26
CDC42P60953 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDC42P60953 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC42P60953 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC42P60953 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CDC42P60953 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CDC42P60953 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CDC42P60953 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 AC087499.5-201ENST00000452760 1342 ntBASIC13.43□□□□□ -0.26
CDC42P60953 TUBB8P4-201ENST00000511806 1324 ntBASIC13.43□□□□□ -0.26
CDC42P60953 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CDC42P60953 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CDC42P60953 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CDC42P60953 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC42P60953 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.43□□□□□ -0.26
CDC42P60953 BX842568.4-201ENST00000421222 227 ntBASIC13.43□□□□□ -0.26
CDC42P60953 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.43□□□□□ -0.26
CDC42P60953 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CDC42P60953 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.43□□□□□ -0.26
CDC42P60953 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC42P60953 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 AC026434.2-201ENST00000506094 1078 ntBASIC13.43□□□□□ -0.26
CDC42P60953 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.43□□□□□ -0.26
CDC42P60953 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 AC036164.1-201ENST00000570544 333 ntBASIC13.43□□□□□ -0.26
CDC42P60953 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDC42P60953 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.43□□□□□ -0.26
CDC42P60953 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.43□□□□□ -0.26
CDC42P60953 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CDC42P60953 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC42P60953 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 261.2 ms