Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.98□□□□□ -0.17
NR1H2P55055 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NR1H2P55055 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NR1H2P55055 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NR1H2P55055 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.98□□□□□ -0.17
NR1H2P55055 AC114501.2-201ENST00000439631 535 ntBASIC13.98□□□□□ -0.17
NR1H2P55055 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H2P55055 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NR1H2P55055 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.98□□□□□ -0.17
NR1H2P55055 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H2P55055 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H2P55055 AL512361.1-201ENST00000554200 418 ntBASIC13.98□□□□□ -0.17
NR1H2P55055 AC104794.3-201ENST00000566840 1248 ntBASIC13.98□□□□□ -0.17
NR1H2P55055 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.98□□□□□ -0.17
NR1H2P55055 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.98□□□□□ -0.17
NR1H2P55055 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H2P55055 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.98□□□□□ -0.17
NR1H2P55055 AC020910.6-201ENST00000623084 1459 ntBASIC13.98□□□□□ -0.17
NR1H2P55055 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H2P55055 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NR1H2P55055 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H2P55055 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H2P55055 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NR1H2P55055 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H2P55055 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H2P55055 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H2P55055 AC111170.3-201ENST00000624282 2464 ntBASIC13.97□□□□□ -0.17
NR1H2P55055 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NR1H2P55055 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 COX5BP8-201ENST00000416911 349 ntBASIC13.97□□□□□ -0.17
NR1H2P55055 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.97□□□□□ -0.17
NR1H2P55055 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H2P55055 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H2P55055 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.97□□□□□ -0.17
NR1H2P55055 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
NR1H2P55055 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H2P55055 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H2P55055 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.97□□□□□ -0.17
NR1H2P55055 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.97□□□□□ -0.17
NR1H2P55055 AGGF1P1-201ENST00000509500 2073 ntBASIC13.97□□□□□ -0.17
NR1H2P55055 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.97□□□□□ -0.17
NR1H2P55055 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NR1H2P55055 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NR1H2P55055 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.96□□□□□ -0.17
NR1H2P55055 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NR1H2P55055 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NR1H2P55055 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H2P55055 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.96□□□□□ -0.17
NR1H2P55055 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms