Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN5P54829 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.16■□□□□ 0.02
PTPN5P54829 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN5P54829 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN5P54829 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PTPN5P54829 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PTPN5P54829 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN5P54829 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PTPN5P54829 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PTPN5P54829 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.15■□□□□ 0.02
PTPN5P54829 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PTPN5P54829 AL627422.1-201ENST00000434104 580 ntBASIC15.15■□□□□ 0.02
PTPN5P54829 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PTPN5P54829 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN5P54829 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN5P54829 AC023824.1-201ENST00000562945 2975 ntBASIC15.15■□□□□ 0.02
PTPN5P54829 AC027139.1-201ENST00000565286 951 ntBASIC15.15■□□□□ 0.02
PTPN5P54829 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.15■□□□□ 0.02
PTPN5P54829 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.15■□□□□ 0.02
PTPN5P54829 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN5P54829 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 AL109837.1-201ENST00000603272 613 ntBASIC15.15■□□□□ 0.02
PTPN5P54829 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN5P54829 AC107464.3-201ENST00000609172 737 ntBASIC15.15■□□□□ 0.02
PTPN5P54829 AC006158.1-201ENST00000610661 249 ntBASIC15.15■□□□□ 0.02
PTPN5P54829 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PTPN5P54829 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PTPN5P54829 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PTPN5P54829 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PTPN5P54829 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN5P54829 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
PTPN5P54829 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN5P54829 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PTPN5P54829 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN5P54829 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTPN5P54829 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN5P54829 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN5P54829 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN5P54829 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN5P54829 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 AC091951.1-201ENST00000512854 2465 ntBASIC15.14■□□□□ 0.01
PTPN5P54829 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 REXO1L5P-201ENST00000622260 2098 ntBASIC15.14■□□□□ 0.01
PTPN5P54829 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN5P54829 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 AC084752.1-201ENST00000509766 622 ntBASIC15.14■□□□□ 0.01
PTPN5P54829 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN5P54829 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN5P54829 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN5P54829 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN5P54829 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTPN5P54829 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN5P54829 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN5P54829 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN5P54829 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN5P54829 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PTPN5P54829 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN5P54829 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN5P54829 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN5P54829 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms