Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC008825.2-201ENST00000603374 718 ntBASIC14.23□□□□□ -0.13
PDX1P52945 AP003419.4-201ENST00000616071 517 ntBASIC14.23□□□□□ -0.13
PDX1P52945 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.23□□□□□ -0.13
PDX1P52945 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PDX1P52945 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
PDX1P52945 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.23□□□□□ -0.13
PDX1P52945 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PDX1P52945 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PDX1P52945 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PDX1P52945 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 CICP14-201ENST00000629111 2732 ntBASIC14.22□□□□□ -0.13
PDX1P52945 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PDX1P52945 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PDX1P52945 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PDX1P52945 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 AC136759.1-202ENST00000530858 2194 ntBASIC14.22□□□□□ -0.13
PDX1P52945 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.22□□□□□ -0.13
PDX1P52945 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.22□□□□□ -0.13
PDX1P52945 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PDX1P52945 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PDX1P52945 FGFR3P1-201ENST00000449999 601 ntBASIC14.22□□□□□ -0.13
PDX1P52945 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.22□□□□□ -0.13
PDX1P52945 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.22□□□□□ -0.13
PDX1P52945 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PDX1P52945 IQSEC3P1-201ENST00000538799 536 ntBASIC14.22□□□□□ -0.13
PDX1P52945 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.22□□□□□ -0.13
PDX1P52945 AC073352.2-201ENST00000609385 439 ntBASIC14.22□□□□□ -0.13
PDX1P52945 MIR6720-201ENST00000611664 98 ntBASIC14.22□□□□□ -0.13
PDX1P52945 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.22□□□□□ -0.13
PDX1P52945 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PDX1P52945 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 AL390755.1-201ENST00000623716 2027 ntBASIC14.22□□□□□ -0.13
PDX1P52945 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.22□□□□□ -0.13
PDX1P52945 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
PDX1P52945 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PDX1P52945 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.22□□□□□ -0.13
PDX1P52945 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
PDX1P52945 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PDX1P52945 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
PDX1P52945 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.21□□□□□ -0.13
PDX1P52945 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.21□□□□□ -0.13
PDX1P52945 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.21□□□□□ -0.13
PDX1P52945 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.21□□□□□ -0.13
PDX1P52945 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.21□□□□□ -0.13
PDX1P52945 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PDX1P52945 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PDX1P52945 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
PDX1P52945 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 LINC00552-201ENST00000625151 2579 ntBASIC14.21□□□□□ -0.13
PDX1P52945 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
PDX1P52945 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 AC078875.1-201ENST00000431907 724 ntBASIC14.21□□□□□ -0.13
PDX1P52945 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.21□□□□□ -0.13
PDX1P52945 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.21□□□□□ -0.13
PDX1P52945 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
PDX1P52945 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.21□□□□□ -0.13
PDX1P52945 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PDX1P52945 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.21□□□□□ -0.13
PDX1P52945 IGLV3-15-201ENST00000518356 244 ntBASIC14.21□□□□□ -0.13
PDX1P52945 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms