Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RAB28P51157 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB28P51157 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB28P51157 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB28P51157 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RAB28P51157 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RAB28P51157 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB28P51157 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB28P51157 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAB28P51157 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RAB28P51157 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.1□□□□□ -0.15
RAB28P51157 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB28P51157 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB28P51157 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.1□□□□□ -0.15
RAB28P51157 AC020914.3-201ENST00000594712 304 ntBASIC14.1□□□□□ -0.15
RAB28P51157 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 AL451050.2-201ENST00000606967 682 ntBASIC14.1□□□□□ -0.15
RAB28P51157 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.1□□□□□ -0.15
RAB28P51157 AC138649.2-201ENST00000615886 705 ntBASIC14.1□□□□□ -0.15
RAB28P51157 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB28P51157 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.1□□□□□ -0.15
RAB28P51157 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.1□□□□□ -0.15
RAB28P51157 AC064801.2-201ENST00000625052 1303 ntBASIC14.1□□□□□ -0.15
RAB28P51157 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAB28P51157 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAB28P51157 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAB28P51157 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 AC068418.2-201ENST00000577309 3703 ntBASIC14.09□□□□□ -0.15
RAB28P51157 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 AC011498.7-201ENST00000624986 2027 ntBASIC14.09□□□□□ -0.15
RAB28P51157 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB28P51157 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB28P51157 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAB28P51157 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.09□□□□□ -0.15
RAB28P51157 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAB28P51157 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 GPAA1P2-201ENST00000417923 928 ntBASIC14.09□□□□□ -0.15
RAB28P51157 AL161932.2-201ENST00000435436 679 ntBASIC14.09□□□□□ -0.15
RAB28P51157 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB28P51157 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB28P51157 AC022494.1-201ENST00000466044 728 ntBASIC14.09□□□□□ -0.15
RAB28P51157 MARK2P5-201ENST00000507649 634 ntBASIC14.09□□□□□ -0.15
RAB28P51157 SNORD3B-2-202ENST00000571722 791 ntBASIC14.09□□□□□ -0.15
RAB28P51157 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAB28P51157 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.09□□□□□ -0.15
RAB28P51157 AL132994.2-201ENST00000603120 687 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms