Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 AL138725.1-201ENST00000407347 1314 ntBASIC13.7□□□□□ -0.22
RNF144AP50876 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF144AP50876 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF144AP50876 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RNF144AP50876 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
RNF144AP50876 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF144AP50876 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RNF144AP50876 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF144AP50876 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF144AP50876 C2orf27AP3-201ENST00000434123 579 ntBASIC13.7□□□□□ -0.22
RNF144AP50876 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 AP003171.2-201ENST00000528208 925 ntBASIC13.7□□□□□ -0.22
RNF144AP50876 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF144AP50876 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF144AP50876 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF144AP50876 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF144AP50876 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RNF144AP50876 AC015936.2-201ENST00000593177 259 ntBASIC13.7□□□□□ -0.22
RNF144AP50876 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.7□□□□□ -0.22
RNF144AP50876 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RNF144AP50876 AL354718.3-201ENST00000616414 581 ntBASIC13.7□□□□□ -0.22
RNF144AP50876 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF144AP50876 CR382287.1-201ENST00000623954 586 ntBASIC13.7□□□□□ -0.22
RNF144AP50876 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF144AP50876 AC015688.4-201ENST00000580780 1647 ntBASIC13.7□□□□□ -0.22
RNF144AP50876 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.7□□□□□ -0.22
RNF144AP50876 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RNF144AP50876 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF144AP50876 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RNF144AP50876 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF144AP50876 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 AC152010.1-201ENST00000415779 2006 ntBASIC13.69□□□□□ -0.22
RNF144AP50876 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RNF144AP50876 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RNF144AP50876 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
RNF144AP50876 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RNF144AP50876 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF144AP50876 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 AC005229.1-201ENST00000392885 409 ntBASIC13.69□□□□□ -0.22
RNF144AP50876 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF144AP50876 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF144AP50876 AC007551.1-201ENST00000457394 519 ntBASIC13.69□□□□□ -0.22
RNF144AP50876 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF144AP50876 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF144AP50876 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF144AP50876 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.69□□□□□ -0.22
RNF144AP50876 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RNF144AP50876 AL022328.1-201ENST00000610050 478 ntBASIC13.69□□□□□ -0.22
RNF144AP50876 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF144AP50876 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RNF144AP50876 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF144AP50876 AL358472.5-202ENST00000641448 1267 ntBASIC13.69□□□□□ -0.22
RNF144AP50876 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RNF144AP50876 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.69□□□□□ -0.22
RNF144AP50876 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms