Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CDC34P49427 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CDC34P49427 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.64□□□□□ -0.55
CDC34P49427 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.64□□□□□ -0.55
CDC34P49427 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.64□□□□□ -0.55
CDC34P49427 RN7SL510P-201ENST00000581311 263 ntBASIC11.64□□□□□ -0.55
CDC34P49427 AL033527.5-202ENST00000641632 1098 ntBASIC11.64□□□□□ -0.55
CDC34P49427 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.64□□□□□ -0.55
CDC34P49427 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.64□□□□□ -0.55
CDC34P49427 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.64□□□□□ -0.55
CDC34P49427 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
CDC34P49427 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CDC34P49427 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
CDC34P49427 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CDC34P49427 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CDC34P49427 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
CDC34P49427 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CDC34P49427 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.63□□□□□ -0.55
CDC34P49427 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CDC34P49427 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC11.63□□□□□ -0.55
CDC34P49427 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CDC34P49427 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 ACTG1P14-201ENST00000446382 1122 ntBASIC11.63□□□□□ -0.55
CDC34P49427 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
CDC34P49427 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.63□□□□□ -0.55
CDC34P49427 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.63□□□□□ -0.55
CDC34P49427 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.63□□□□□ -0.55
CDC34P49427 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CDC34P49427 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.63□□□□□ -0.55
CDC34P49427 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.63□□□□□ -0.55
CDC34P49427 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.63□□□□□ -0.55
CDC34P49427 AC104692.2-201ENST00000603054 253 ntBASIC11.63□□□□□ -0.55
CDC34P49427 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.63□□□□□ -0.55
CDC34P49427 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.63□□□□□ -0.55
CDC34P49427 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.63□□□□□ -0.55
CDC34P49427 AL136172.1-201ENST00000598590 1394 ntBASIC11.63□□□□□ -0.55
CDC34P49427 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CDC34P49427 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.63□□□□□ -0.55
CDC34P49427 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
CDC34P49427 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC11.63□□□□□ -0.55
CDC34P49427 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
CDC34P49427 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CDC34P49427 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 BEND3P3-201ENST00000611030 2440 ntBASIC11.62□□□□□ -0.55
CDC34P49427 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC34P49427 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 AL157996.1-201ENST00000624684 2299 ntBASIC11.62□□□□□ -0.55
CDC34P49427 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.62□□□□□ -0.55
CDC34P49427 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC11.62□□□□□ -0.55
CDC34P49427 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.62□□□□□ -0.55
CDC34P49427 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CDC34P49427 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms