Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
TM4SF4P48230 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TM4SF4P48230 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.21■□□□□ 0.18
TM4SF4P48230 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TM4SF4P48230 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
TM4SF4P48230 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.2■□□□□ 0.18
TM4SF4P48230 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
TM4SF4P48230 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TM4SF4P48230 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.2■□□□□ 0.18
TM4SF4P48230 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.2■□□□□ 0.18
TM4SF4P48230 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC16.2■□□□□ 0.18
TM4SF4P48230 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 HNRNPA1P25-201ENST00000422644 937 ntBASIC16.2■□□□□ 0.18
TM4SF4P48230 AC103563.1-201ENST00000429316 123 ntBASIC16.2■□□□□ 0.18
TM4SF4P48230 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.2■□□□□ 0.18
TM4SF4P48230 AL136084.1-201ENST00000449172 318 ntBASIC16.2■□□□□ 0.18
TM4SF4P48230 AC008494.1-201ENST00000497612 796 ntBASIC16.2■□□□□ 0.18
TM4SF4P48230 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC16.2■□□□□ 0.18
TM4SF4P48230 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC16.2■□□□□ 0.18
TM4SF4P48230 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC16.2■□□□□ 0.18
TM4SF4P48230 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 ACTBP9-201ENST00000587663 1099 ntBASIC16.2■□□□□ 0.18
TM4SF4P48230 AL512324.3-201ENST00000619383 882 ntBASIC16.2■□□□□ 0.18
TM4SF4P48230 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC16.2■□□□□ 0.18
TM4SF4P48230 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 LILRP2-202ENST00000413572 1383 ntBASIC16.2■□□□□ 0.18
TM4SF4P48230 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.2■□□□□ 0.18
TM4SF4P48230 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.2■□□□□ 0.18
TM4SF4P48230 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.2■□□□□ 0.18
TM4SF4P48230 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.2■□□□□ 0.18
TM4SF4P48230 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.2■□□□□ 0.18
TM4SF4P48230 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TM4SF4P48230 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TM4SF4P48230 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TM4SF4P48230 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC16.19■□□□□ 0.18
TM4SF4P48230 TMBIM7P-203ENST00000641617 1718 ntBASIC16.19■□□□□ 0.18
TM4SF4P48230 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TM4SF4P48230 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TM4SF4P48230 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TM4SF4P48230 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.19■□□□□ 0.18
TM4SF4P48230 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.19■□□□□ 0.18
TM4SF4P48230 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TM4SF4P48230 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.19■□□□□ 0.18
TM4SF4P48230 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TM4SF4P48230 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.19■□□□□ 0.18
TM4SF4P48230 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.19■□□□□ 0.18
TM4SF4P48230 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TM4SF4P48230 SALL4P6-201ENST00000429385 1691 ntBASIC16.19■□□□□ 0.18
TM4SF4P48230 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TM4SF4P48230 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TM4SF4P48230 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.19■□□□□ 0.18
TM4SF4P48230 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TM4SF4P48230 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TM4SF4P48230 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TM4SF4P48230 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TM4SF4P48230 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC16.19■□□□□ 0.18
TM4SF4P48230 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TM4SF4P48230 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC16.19■□□□□ 0.18
TM4SF4P48230 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.19■□□□□ 0.18
TM4SF4P48230 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC16.19■□□□□ 0.18
TM4SF4P48230 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC16.19■□□□□ 0.18
TM4SF4P48230 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC16.19■□□□□ 0.18
TM4SF4P48230 AC092810.2-201ENST00000431570 362 ntBASIC16.19■□□□□ 0.18
TM4SF4P48230 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.19■□□□□ 0.18
TM4SF4P48230 AL356000.1-201ENST00000441073 1238 ntBASIC16.19■□□□□ 0.18
TM4SF4P48230 DPY19L2P4-201ENST00000479881 442 ntBASIC16.19■□□□□ 0.18
TM4SF4P48230 AC092910.2-201ENST00000491262 348 ntBASIC16.19■□□□□ 0.18
TM4SF4P48230 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC16.19■□□□□ 0.18
TM4SF4P48230 ISL1-203ENST00000511384 981 ntTSL 5 BASIC16.19■□□□□ 0.18
TM4SF4P48230 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TM4SF4P48230 RN7SL480P-201ENST00000581481 294 ntBASIC16.19■□□□□ 0.18
TM4SF4P48230 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC16.19■□□□□ 0.18
TM4SF4P48230 AL049840.2-201ENST00000602722 535 ntBASIC16.19■□□□□ 0.18
TM4SF4P48230 AC006986.1-201ENST00000612764 241 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms