Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.25■□□□□ 0.03
MMP13P45452 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MMP13P45452 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.25■□□□□ 0.03
MMP13P45452 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.25■□□□□ 0.03
MMP13P45452 BOLA2P3-201ENST00000404566 256 ntBASIC15.25■□□□□ 0.03
MMP13P45452 CNN2P8-201ENST00000421872 913 ntBASIC15.25■□□□□ 0.03
MMP13P45452 AC112492.5-201ENST00000421897 457 ntBASIC15.25■□□□□ 0.03
MMP13P45452 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.25■□□□□ 0.03
MMP13P45452 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.25■□□□□ 0.03
MMP13P45452 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.25■□□□□ 0.03
MMP13P45452 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.25■□□□□ 0.03
MMP13P45452 AC078819.1-201ENST00000547454 765 ntBASIC15.25■□□□□ 0.03
MMP13P45452 AC012085.1-201ENST00000548270 765 ntBASIC15.25■□□□□ 0.03
MMP13P45452 RAB43P1-201ENST00000561790 589 ntBASIC15.25■□□□□ 0.03
MMP13P45452 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.25■□□□□ 0.03
MMP13P45452 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
MMP13P45452 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 PDIA3P1-201ENST00000471856 1510 ntBASIC15.25■□□□□ 0.03
MMP13P45452 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
MMP13P45452 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 AC020910.6-201ENST00000623084 1459 ntBASIC15.25■□□□□ 0.03
MMP13P45452 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.25■□□□□ 0.03
MMP13P45452 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
MMP13P45452 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.25■□□□□ 0.03
MMP13P45452 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.25■□□□□ 0.03
MMP13P45452 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
MMP13P45452 CICP16-201ENST00000502609 2813 ntBASIC15.25■□□□□ 0.03
MMP13P45452 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MMP13P45452 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MMP13P45452 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP13P45452 AL138725.1-201ENST00000407347 1314 ntBASIC15.24■□□□□ 0.03
MMP13P45452 FKBP4P6-201ENST00000457486 1332 ntBASIC15.24■□□□□ 0.03
MMP13P45452 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP13P45452 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MMP13P45452 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
MMP13P45452 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 ARSEP1-201ENST00000420443 635 ntBASIC15.24■□□□□ 0.03
MMP13P45452 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP13P45452 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.24■□□□□ 0.03
MMP13P45452 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.24■□□□□ 0.03
MMP13P45452 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 AL512343.1-201ENST00000605837 169 ntBASIC15.24■□□□□ 0.03
MMP13P45452 AC138696.2-201ENST00000607376 223 ntBASIC15.24■□□□□ 0.03
MMP13P45452 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MMP13P45452 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MMP13P45452 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
MMP13P45452 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
MMP13P45452 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.24■□□□□ 0.03
MMP13P45452 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MMP13P45452 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.24■□□□□ 0.03
MMP13P45452 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.24■□□□□ 0.03
MMP13P45452 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP13P45452 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MMP13P45452 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MMP13P45452 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MMP13P45452 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.23■□□□□ 0.03
MMP13P45452 AC011840.2-201ENST00000563063 1520 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms