Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A1P43005 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A1P43005 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A1P43005 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A1P43005 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A1P43005 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A1P43005 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SLC1A1P43005 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A1P43005 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A1P43005 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A1P43005 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC1A1P43005 AL022328.1-201ENST00000610050 478 ntBASIC15.32■□□□□ 0.04
SLC1A1P43005 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A1P43005 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A1P43005 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A1P43005 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 AC089987.1-201ENST00000551654 2209 ntBASIC15.32■□□□□ 0.04
SLC1A1P43005 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A1P43005 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A1P43005 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SLC1A1P43005 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC1A1P43005 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC1A1P43005 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
SLC1A1P43005 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SLC1A1P43005 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A1P43005 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
SLC1A1P43005 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A1P43005 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC1A1P43005 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A1P43005 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC1A1P43005 CICP12-201ENST00000455801 843 ntBASIC15.31■□□□□ 0.04
SLC1A1P43005 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC1A1P43005 RN7SL713P-201ENST00000582127 302 ntBASIC15.31■□□□□ 0.04
SLC1A1P43005 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC1A1P43005 AC233724.13-201ENST00000598383 410 ntBASIC15.31■□□□□ 0.04
SLC1A1P43005 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.31■□□□□ 0.04
SLC1A1P43005 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC1A1P43005 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SLC1A1P43005 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC1A1P43005 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
SLC1A1P43005 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC1A1P43005 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A1P43005 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A1P43005 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A1P43005 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC1A1P43005 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SLC1A1P43005 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC1A1P43005 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC1A1P43005 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A1P43005 FAM197Y7-201ENST00000432892 766 ntBASIC15.3■□□□□ 0.04
SLC1A1P43005 AC016694.1-201ENST00000434179 700 ntBASIC15.3■□□□□ 0.04
SLC1A1P43005 BCRP2-202ENST00000447763 634 ntBASIC15.3■□□□□ 0.04
SLC1A1P43005 AL590640.2-201ENST00000457038 527 ntBASIC15.3■□□□□ 0.04
SLC1A1P43005 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms