Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.85□□□□□ -0.03
RPA3P35244 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.85□□□□□ -0.03
RPA3P35244 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.85□□□□□ -0.03
RPA3P35244 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.85□□□□□ -0.03
RPA3P35244 COX20P2-201ENST00000452636 358 ntBASIC14.85□□□□□ -0.03
RPA3P35244 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RPA3P35244 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.85□□□□□ -0.03
RPA3P35244 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.85□□□□□ -0.03
RPA3P35244 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.85□□□□□ -0.03
RPA3P35244 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RPA3P35244 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RPA3P35244 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RPA3P35244 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RPA3P35244 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RPA3P35244 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RPA3P35244 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 AL157996.1-201ENST00000624684 2299 ntBASIC14.85□□□□□ -0.03
RPA3P35244 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPA3P35244 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.85□□□□□ -0.03
RPA3P35244 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.85□□□□□ -0.03
RPA3P35244 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.84□□□□□ -0.03
RPA3P35244 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.84□□□□□ -0.03
RPA3P35244 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.84□□□□□ -0.03
RPA3P35244 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RPA3P35244 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.84□□□□□ -0.03
RPA3P35244 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RPA3P35244 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.84□□□□□ -0.03
RPA3P35244 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.84□□□□□ -0.03
RPA3P35244 AP005018.1-201ENST00000525475 301 ntBASIC14.84□□□□□ -0.03
RPA3P35244 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.84□□□□□ -0.03
RPA3P35244 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.84□□□□□ -0.03
RPA3P35244 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.84□□□□□ -0.03
RPA3P35244 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.84□□□□□ -0.03
RPA3P35244 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.84□□□□□ -0.03
RPA3P35244 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.84□□□□□ -0.03
RPA3P35244 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.84□□□□□ -0.03
RPA3P35244 AC087386.2-201ENST00000623212 4637 ntBASIC14.84□□□□□ -0.03
RPA3P35244 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RPA3P35244 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPA3P35244 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.84□□□□□ -0.03
RPA3P35244 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.84□□□□□ -0.03
RPA3P35244 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RPA3P35244 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.84□□□□□ -0.03
RPA3P35244 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.84□□□□□ -0.03
RPA3P35244 AC068760.1-201ENST00000493579 1953 ntBASIC14.84□□□□□ -0.03
RPA3P35244 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPA3P35244 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
RPA3P35244 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
RPA3P35244 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
RPA3P35244 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RPA3P35244 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.83□□□□□ -0.03
RPA3P35244 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPA3P35244 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 AL591122.2-201ENST00000624125 1853 ntBASIC14.83□□□□□ -0.04
RPA3P35244 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RPA3P35244 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RPA3P35244 NUS1P3-201ENST00000423502 862 ntBASIC14.83□□□□□ -0.04
RPA3P35244 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.83□□□□□ -0.04
RPA3P35244 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPA3P35244 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms