Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 FKBP4P6-201ENST00000457486 1332 ntBASIC15.96■□□□□ 0.15
RFX1P22670 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.96■□□□□ 0.15
RFX1P22670 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.96■□□□□ 0.15
RFX1P22670 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 AC139749.1-202ENST00000617529 3139 ntBASIC15.96■□□□□ 0.15
RFX1P22670 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
RFX1P22670 MIR769-201ENST00000390225 118 ntBASIC15.96■□□□□ 0.15
RFX1P22670 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
RFX1P22670 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.96■□□□□ 0.15
RFX1P22670 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.96■□□□□ 0.15
RFX1P22670 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.96■□□□□ 0.15
RFX1P22670 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.96■□□□□ 0.15
RFX1P22670 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.96■□□□□ 0.15
RFX1P22670 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 AC015688.4-201ENST00000580780 1647 ntBASIC15.96■□□□□ 0.15
RFX1P22670 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
RFX1P22670 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX1P22670 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RFX1P22670 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
RFX1P22670 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
RFX1P22670 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
RFX1P22670 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RFX1P22670 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX1P22670 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.95■□□□□ 0.14
RFX1P22670 KHSRPP1-201ENST00000427983 1768 ntBASIC15.95■□□□□ 0.14
RFX1P22670 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX1P22670 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 AC015656.1-201ENST00000624209 3578 ntBASIC15.95■□□□□ 0.14
RFX1P22670 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.95■□□□□ 0.14
RFX1P22670 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 TPM3P8-201ENST00000330554 643 ntBASIC15.95■□□□□ 0.14
RFX1P22670 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.95■□□□□ 0.14
RFX1P22670 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 RN7SKP175-201ENST00000408472 289 ntBASIC15.95■□□□□ 0.14
RFX1P22670 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.95■□□□□ 0.14
RFX1P22670 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.95■□□□□ 0.14
RFX1P22670 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.95■□□□□ 0.14
RFX1P22670 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX1P22670 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.95■□□□□ 0.14
RFX1P22670 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.95■□□□□ 0.14
RFX1P22670 HIST2H2BC-201ENST00000498492 580 ntBASIC15.95■□□□□ 0.14
RFX1P22670 AC245884.6-201ENST00000515672 1067 ntBASIC15.95■□□□□ 0.14
RFX1P22670 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.95■□□□□ 0.14
RFX1P22670 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.95■□□□□ 0.14
RFX1P22670 AC105129.2-201ENST00000559536 390 ntBASIC15.95■□□□□ 0.14
RFX1P22670 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC15.95■□□□□ 0.14
RFX1P22670 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.95■□□□□ 0.14
RFX1P22670 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX1P22670 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RFX1P22670 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.95■□□□□ 0.14
RFX1P22670 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.95■□□□□ 0.14
RFX1P22670 CU633904.3-201ENST00000624042 1029 ntBASIC15.95■□□□□ 0.14
RFX1P22670 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX1P22670 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX1P22670 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RFX1P22670 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.95■□□□□ 0.14
RFX1P22670 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFX1P22670 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms