Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP4AP20648 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP4AP20648 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP4AP20648 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP4AP20648 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP4AP20648 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP4AP20648 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP4AP20648 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.17■□□□□ 0.18
ATP4AP20648 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
ATP4AP20648 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP4AP20648 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP4AP20648 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP4AP20648 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP4AP20648 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ATP4AP20648 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ATP4AP20648 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ATP4AP20648 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ATP4AP20648 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP4AP20648 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 OR2K2-202ENST00000374428 1038 ntBASIC16.16■□□□□ 0.18
ATP4AP20648 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.16■□□□□ 0.18
ATP4AP20648 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 TSPY25P-201ENST00000429463 745 ntBASIC16.16■□□□□ 0.18
ATP4AP20648 AL353637.1-201ENST00000451571 732 ntBASIC16.16■□□□□ 0.18
ATP4AP20648 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP4AP20648 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.16■□□□□ 0.18
ATP4AP20648 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.16■□□□□ 0.18
ATP4AP20648 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP4AP20648 AL109837.1-201ENST00000603272 613 ntBASIC16.16■□□□□ 0.18
ATP4AP20648 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
ATP4AP20648 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
ATP4AP20648 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ATP4AP20648 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP4AP20648 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP4AP20648 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ATP4AP20648 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP4AP20648 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP4AP20648 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP4AP20648 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP4AP20648 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ATP4AP20648 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP4AP20648 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 AP001267.2-201ENST00000532619 2086 ntBASIC16.15■□□□□ 0.18
ATP4AP20648 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP4AP20648 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP4AP20648 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ATP4AP20648 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP4AP20648 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
ATP4AP20648 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP4AP20648 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.15■□□□□ 0.18
ATP4AP20648 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP4AP20648 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP4AP20648 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP4AP20648 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.15■□□□□ 0.18
ATP4AP20648 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.15■□□□□ 0.18
ATP4AP20648 AP002353.1-201ENST00000528257 1599 ntBASIC16.15■□□□□ 0.18
ATP4AP20648 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP4AP20648 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
ATP4AP20648 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.15■□□□□ 0.18
ATP4AP20648 AC012044.1-201ENST00000603431 297 ntBASIC16.15■□□□□ 0.18
ATP4AP20648 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ATP4AP20648 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.15■□□□□ 0.18
ATP4AP20648 AC006453.1-201ENST00000636037 1257 ntBASIC16.15■□□□□ 0.18
ATP4AP20648 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP4AP20648 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms