Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PRKCAP17252 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PRKCAP17252 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PRKCAP17252 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PRKCAP17252 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PRKCAP17252 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PRKCAP17252 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PRKCAP17252 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PRKCAP17252 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PRKCAP17252 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PRKCAP17252 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PRKCAP17252 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PRKCAP17252 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PRKCAP17252 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 AC131902.2-201ENST00000566892 2172 ntBASIC13.66□□□□□ -0.22
PRKCAP17252 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.66□□□□□ -0.22
PRKCAP17252 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PRKCAP17252 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.66□□□□□ -0.22
PRKCAP17252 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PRKCAP17252 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.66□□□□□ -0.22
PRKCAP17252 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.66□□□□□ -0.22
PRKCAP17252 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.66□□□□□ -0.22
PRKCAP17252 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.66□□□□□ -0.22
PRKCAP17252 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.66□□□□□ -0.22
PRKCAP17252 AC005034.1-201ENST00000426657 489 ntBASIC13.66□□□□□ -0.22
PRKCAP17252 C2orf27AP3-201ENST00000434123 579 ntBASIC13.66□□□□□ -0.22
PRKCAP17252 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 FO681548.1-201ENST00000455617 1132 ntBASIC13.66□□□□□ -0.22
PRKCAP17252 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PRKCAP17252 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PRKCAP17252 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.66□□□□□ -0.22
PRKCAP17252 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.66□□□□□ -0.22
PRKCAP17252 AL354718.3-201ENST00000616414 581 ntBASIC13.66□□□□□ -0.22
PRKCAP17252 ENPP7P14-201ENST00000621765 1040 ntBASIC13.66□□□□□ -0.22
PRKCAP17252 AC132938.4-201ENST00000623835 848 ntBASIC13.66□□□□□ -0.22
PRKCAP17252 CR382287.1-201ENST00000623954 586 ntBASIC13.66□□□□□ -0.22
PRKCAP17252 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.66□□□□□ -0.22
PRKCAP17252 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.66□□□□□ -0.22
PRKCAP17252 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PRKCAP17252 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.66□□□□□ -0.22
PRKCAP17252 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PRKCAP17252 AC018529.2-202ENST00000611482 3087 ntBASIC13.66□□□□□ -0.22
PRKCAP17252 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 AC105206.1-202ENST00000314927 2368 ntBASIC13.66□□□□□ -0.22
PRKCAP17252 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.66□□□□□ -0.22
PRKCAP17252 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRKCAP17252 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PRKCAP17252 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.65□□□□□ -0.22
PRKCAP17252 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PRKCAP17252 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
PRKCAP17252 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PRKCAP17252 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.65□□□□□ -0.22
PRKCAP17252 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PRKCAP17252 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PRKCAP17252 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PRKCAP17252 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.65□□□□□ -0.22
PRKCAP17252 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PRKCAP17252 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PRKCAP17252 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.65□□□□□ -0.22
PRKCAP17252 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.65□□□□□ -0.22
PRKCAP17252 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
PRKCAP17252 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PRKCAP17252 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.65□□□□□ -0.22
PRKCAP17252 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PRKCAP17252 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PRKCAP17252 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.65□□□□□ -0.22
PRKCAP17252 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.65□□□□□ -0.22
PRKCAP17252 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PRKCAP17252 POM121L8P-201ENST00000417732 1281 ntBASIC13.65□□□□□ -0.22
PRKCAP17252 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.65□□□□□ -0.22
PRKCAP17252 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.65□□□□□ -0.22
PRKCAP17252 KRT43P-201ENST00000434019 910 ntBASIC13.65□□□□□ -0.22
PRKCAP17252 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PRKCAP17252 POM121L9P-203ENST00000441984 1285 ntBASIC13.65□□□□□ -0.22
PRKCAP17252 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.65□□□□□ -0.22
PRKCAP17252 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.65□□□□□ -0.22
PRKCAP17252 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PRKCAP17252 FTH1P14-201ENST00000482930 551 ntBASIC13.65□□□□□ -0.22
PRKCAP17252 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.65□□□□□ -0.22
PRKCAP17252 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PRKCAP17252 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PRKCAP17252 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PRKCAP17252 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.65□□□□□ -0.22
PRKCAP17252 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.65□□□□□ -0.22
PRKCAP17252 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.65□□□□□ -0.22
PRKCAP17252 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms