Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
TOP2AP11388 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TOP2AP11388 RNA5SP491-201ENST00000362936 118 ntBASIC24.67■■□□□ 1.54
TOP2AP11388 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC24.67■■□□□ 1.54
TOP2AP11388 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
TOP2AP11388 CD44-224ENST00000526669 870 ntTSL 5 BASIC24.67■■□□□ 1.54
TOP2AP11388 AL590235.1-201ENST00000564650 861 ntBASIC24.67■■□□□ 1.54
TOP2AP11388 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TOP2AP11388 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TOP2AP11388 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
TOP2AP11388 DDC-204ENST00000426377 1700 ntTSL 3 BASIC24.67■■□□□ 1.54
TOP2AP11388 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TOP2AP11388 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC24.67■■□□□ 1.54
TOP2AP11388 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC24.67■■□□□ 1.54
TOP2AP11388 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TOP2AP11388 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
TOP2AP11388 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
TOP2AP11388 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
TOP2AP11388 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC24.66■■□□□ 1.54
TOP2AP11388 VDAC1P11-201ENST00000458323 852 ntBASIC24.66■■□□□ 1.54
TOP2AP11388 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC24.66■■□□□ 1.54
TOP2AP11388 PRMT1P1-201ENST00000604252 1009 ntBASIC24.66■■□□□ 1.54
TOP2AP11388 AL591424.3-201ENST00000614278 872 ntBASIC24.66■■□□□ 1.54
TOP2AP11388 AC026120.2-201ENST00000617239 309 ntBASIC24.66■■□□□ 1.54
TOP2AP11388 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC24.66■■□□□ 1.54
TOP2AP11388 PLS3-210ENST00000626746 216 ntTSL 4 BASIC24.66■■□□□ 1.54
TOP2AP11388 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC24.66■■□□□ 1.54
TOP2AP11388 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC24.66■■□□□ 1.54
TOP2AP11388 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC24.66■■□□□ 1.54
TOP2AP11388 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
TOP2AP11388 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC24.66■■□□□ 1.54
TOP2AP11388 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TOP2AP11388 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC24.66■■□□□ 1.54
TOP2AP11388 UROS-201ENST00000368774 744 ntTSL 2 BASIC24.66■■□□□ 1.54
TOP2AP11388 AC103563.1-201ENST00000429316 123 ntBASIC24.66■■□□□ 1.54
TOP2AP11388 AC025594.1-201ENST00000469533 543 ntBASIC24.66■■□□□ 1.54
TOP2AP11388 ANKRD26P1-203ENST00000569528 966 ntBASIC24.66■■□□□ 1.54
TOP2AP11388 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC24.66■■□□□ 1.54
TOP2AP11388 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC24.66■■□□□ 1.54
TOP2AP11388 AC139713.2-207ENST00000641556 1292 ntBASIC24.66■■□□□ 1.54
TOP2AP11388 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TOP2AP11388 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC24.65■■□□□ 1.54
TOP2AP11388 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC24.65■■□□□ 1.54
TOP2AP11388 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TOP2AP11388 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
TOP2AP11388 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC24.65■■□□□ 1.54
TOP2AP11388 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
TOP2AP11388 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
TOP2AP11388 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TOP2AP11388 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TOP2AP11388 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
TOP2AP11388 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TOP2AP11388 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC24.65■■□□□ 1.54
TOP2AP11388 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC24.65■■□□□ 1.54
TOP2AP11388 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC24.65■■□□□ 1.54
TOP2AP11388 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TOP2AP11388 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TOP2AP11388 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TOP2AP11388 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TOP2AP11388 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC24.65■■□□□ 1.54
TOP2AP11388 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC24.65■■□□□ 1.54
TOP2AP11388 SNORA57-201ENST00000383870 149 ntBASIC24.65■■□□□ 1.54
TOP2AP11388 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TOP2AP11388 AC092810.2-201ENST00000431570 362 ntBASIC24.65■■□□□ 1.54
TOP2AP11388 MIR4746-201ENST00000579802 71 ntBASIC24.65■■□□□ 1.54
TOP2AP11388 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC24.65■■□□□ 1.54
TOP2AP11388 AC113385.2-201ENST00000614465 762 ntBASIC24.65■■□□□ 1.54
TOP2AP11388 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC24.65■■□□□ 1.54
TOP2AP11388 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
TOP2AP11388 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TOP2AP11388 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
TOP2AP11388 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TOP2AP11388 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
TOP2AP11388 RPL10-203ENST00000406022 748 ntTSL 3 BASIC24.64■■□□□ 1.53
TOP2AP11388 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
TOP2AP11388 AC079250.1-201ENST00000456046 531 ntBASIC24.64■■□□□ 1.53
TOP2AP11388 AC018846.1-201ENST00000568231 183 ntBASIC24.64■■□□□ 1.53
TOP2AP11388 FAM187B2P-201ENST00000577135 713 ntBASIC24.64■■□□□ 1.53
TOP2AP11388 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC24.64■■□□□ 1.53
TOP2AP11388 MIR8071-1-201ENST00000616769 65 ntBASIC24.64■■□□□ 1.53
TOP2AP11388 MIR8071-2-201ENST00000616772 65 ntBASIC24.64■■□□□ 1.53
TOP2AP11388 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC24.64■■□□□ 1.53
TOP2AP11388 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
TOP2AP11388 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TOP2AP11388 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TOP2AP11388 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms