Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB1P11230 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB1P11230 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB1P11230 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.8□□□□□ -0.04
CHRNB1P11230 HLA-DMA-203ENST00000395305 777 ntBASIC14.8□□□□□ -0.04
CHRNB1P11230 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB1P11230 AC092638.2-201ENST00000441105 947 ntBASIC14.8□□□□□ -0.04
CHRNB1P11230 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CHRNB1P11230 RN7SL530P-201ENST00000485097 298 ntBASIC14.8□□□□□ -0.04
CHRNB1P11230 ALG1L6P-201ENST00000515248 758 ntBASIC14.8□□□□□ -0.04
CHRNB1P11230 AP000911.2-201ENST00000534330 502 ntBASIC14.8□□□□□ -0.04
CHRNB1P11230 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB1P11230 AL022334.2-201ENST00000610000 484 ntBASIC14.8□□□□□ -0.04
CHRNB1P11230 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CHRNB1P11230 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB1P11230 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CHRNB1P11230 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB1P11230 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB1P11230 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB1P11230 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB1P11230 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.8□□□□□ -0.04
CHRNB1P11230 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CHRNB1P11230 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.8□□□□□ -0.04
CHRNB1P11230 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB1P11230 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CHRNB1P11230 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB1P11230 MARK2P16-201ENST00000605714 1723 ntBASIC14.8□□□□□ -0.04
CHRNB1P11230 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB1P11230 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CHRNB1P11230 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.8□□□□□ -0.04
CHRNB1P11230 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB1P11230 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB1P11230 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB1P11230 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CHRNB1P11230 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHRNB1P11230 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHRNB1P11230 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.8□□□□□ -0.04
CHRNB1P11230 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 BAK1P1-201ENST00000317045 636 ntBASIC14.79□□□□□ -0.04
CHRNB1P11230 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 AC073347.1-201ENST00000421633 2643 ntBASIC14.79□□□□□ -0.04
CHRNB1P11230 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNB1P11230 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNB1P11230 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNB1P11230 AL354861.1-201ENST00000445213 355 ntBASIC14.79□□□□□ -0.04
CHRNB1P11230 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNB1P11230 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHRNB1P11230 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNB1P11230 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.79□□□□□ -0.04
CHRNB1P11230 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 AC027237.1-201ENST00000560942 655 ntBASIC14.79□□□□□ -0.04
CHRNB1P11230 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.79□□□□□ -0.04
CHRNB1P11230 RN7SL470P-201ENST00000583069 259 ntBASIC14.79□□□□□ -0.04
CHRNB1P11230 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHRNB1P11230 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CHRNB1P11230 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNB1P11230 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CHRNB1P11230 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNB1P11230 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CHRNB1P11230 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.79□□□□□ -0.04
CHRNB1P11230 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.79□□□□□ -0.04
CHRNB1P11230 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHRNB1P11230 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHRNB1P11230 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB1P11230 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB1P11230 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB1P11230 IL9RP3-201ENST00000442856 1674 ntBASIC14.78□□□□□ -0.04
CHRNB1P11230 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNB1P11230 MROH4P-201ENST00000431302 1578 ntBASIC14.78□□□□□ -0.04
CHRNB1P11230 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB1P11230 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB1P11230 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNB1P11230 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CHRNB1P11230 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB1P11230 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNB1P11230 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB1P11230 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms