Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.46■□□□□ 0.39
CHGBP05060 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHGBP05060 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHGBP05060 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 AP002353.1-201ENST00000528257 1599 ntBASIC17.46■□□□□ 0.39
CHGBP05060 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.46■□□□□ 0.39
CHGBP05060 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
CHGBP05060 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHGBP05060 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHGBP05060 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHGBP05060 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.46■□□□□ 0.39
CHGBP05060 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.46■□□□□ 0.39
CHGBP05060 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.46■□□□□ 0.39
CHGBP05060 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.46■□□□□ 0.39
CHGBP05060 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.46■□□□□ 0.39
CHGBP05060 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.46■□□□□ 0.39
CHGBP05060 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.46■□□□□ 0.39
CHGBP05060 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CHGBP05060 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.46■□□□□ 0.39
CHGBP05060 AC124068.2-201ENST00000569473 1109 ntBASIC17.46■□□□□ 0.39
CHGBP05060 AC103810.3-201ENST00000583567 96 ntBASIC17.46■□□□□ 0.39
CHGBP05060 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.46■□□□□ 0.39
CHGBP05060 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHGBP05060 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
CHGBP05060 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.46■□□□□ 0.39
CHGBP05060 FAM45BP-202ENST00000592932 1624 ntBASIC17.46■□□□□ 0.39
CHGBP05060 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHGBP05060 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHGBP05060 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHGBP05060 AL928921.2-201ENST00000641325 2442 ntBASIC17.46■□□□□ 0.38
CHGBP05060 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHGBP05060 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHGBP05060 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHGBP05060 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
CHGBP05060 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHGBP05060 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17.45■□□□□ 0.38
CHGBP05060 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CHGBP05060 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.45■□□□□ 0.38
CHGBP05060 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 CHMP4BP1-201ENST00000556017 588 ntBASIC17.45■□□□□ 0.38
CHGBP05060 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.45■□□□□ 0.38
CHGBP05060 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.45■□□□□ 0.38
CHGBP05060 NDUFV2P1-201ENST00000596415 907 ntBASIC17.45■□□□□ 0.38
CHGBP05060 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.45■□□□□ 0.38
CHGBP05060 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHGBP05060 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHGBP05060 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 HSPA7-201ENST00000445535 1927 ntBASIC17.45■□□□□ 0.38
CHGBP05060 AC064801.2-201ENST00000625052 1303 ntBASIC17.45■□□□□ 0.38
CHGBP05060 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.45■□□□□ 0.38
CHGBP05060 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHGBP05060 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
CHGBP05060 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.44■□□□□ 0.38
CHGBP05060 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.44■□□□□ 0.38
CHGBP05060 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.44■□□□□ 0.38
CHGBP05060 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.44■□□□□ 0.38
CHGBP05060 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHGBP05060 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms