Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 STARP1-201ENST00000397973 869 ntBASIC11.7□□□□□ -0.54
APOC3P02656 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.7□□□□□ -0.54
APOC3P02656 PTCHD3P3-201ENST00000403073 906 ntBASIC11.7□□□□□ -0.54
APOC3P02656 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.7□□□□□ -0.54
APOC3P02656 MAP2K4P1-201ENST00000438453 1195 ntBASIC11.7□□□□□ -0.54
APOC3P02656 KRT16P4-201ENST00000453883 522 ntBASIC11.7□□□□□ -0.54
APOC3P02656 MYADML-201ENST00000474610 2147 ntBASIC11.7□□□□□ -0.54
APOC3P02656 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 MIR3909-201ENST00000579518 119 ntBASIC11.7□□□□□ -0.54
APOC3P02656 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 SPIB-206ENST00000596074 847 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 AC009955.4-201ENST00000597192 544 ntBASIC11.7□□□□□ -0.54
APOC3P02656 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 IGHV3-41-201ENST00000613121 348 ntBASIC11.7□□□□□ -0.54
APOC3P02656 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.7□□□□□ -0.54
APOC3P02656 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
APOC3P02656 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.7□□□□□ -0.54
APOC3P02656 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 KRT8P37-201ENST00000451609 1420 ntBASIC11.69□□□□□ -0.54
APOC3P02656 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 EGLN3-205ENST00000547327 2849 ntBASIC11.69□□□□□ -0.54
APOC3P02656 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC11.69□□□□□ -0.54
APOC3P02656 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
APOC3P02656 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
APOC3P02656 AC012313.8-201ENST00000595059 5402 ntBASIC11.69□□□□□ -0.54
APOC3P02656 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
APOC3P02656 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC11.69□□□□□ -0.54
APOC3P02656 CCT7P1-201ENST00000406551 1611 ntBASIC11.69□□□□□ -0.54
APOC3P02656 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
APOC3P02656 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
APOC3P02656 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
APOC3P02656 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
APOC3P02656 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.69□□□□□ -0.54
APOC3P02656 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
APOC3P02656 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.69□□□□□ -0.54
APOC3P02656 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
APOC3P02656 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.69□□□□□ -0.54
APOC3P02656 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC11.69□□□□□ -0.54
APOC3P02656 KRT18P34-201ENST00000488218 1270 ntBASIC11.69□□□□□ -0.54
APOC3P02656 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.69□□□□□ -0.54
APOC3P02656 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.69□□□□□ -0.54
APOC3P02656 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC11.69□□□□□ -0.54
APOC3P02656 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.69□□□□□ -0.54
APOC3P02656 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.69□□□□□ -0.54
APOC3P02656 Z99916.2-201ENST00000604037 246 ntBASIC11.69□□□□□ -0.54
APOC3P02656 FAM197Y4-202ENST00000622692 608 ntBASIC11.69□□□□□ -0.54
APOC3P02656 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.69□□□□□ -0.54
APOC3P02656 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
APOC3P02656 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
APOC3P02656 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
APOC3P02656 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms