Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
HLA-AP01891 AC109322.1-201ENST00000524499 1264 ntBASIC12.44□□□□□ -0.42
HLA-AP01891 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 BANF1P1-201ENST00000553684 263 ntBASIC12.44□□□□□ -0.42
HLA-AP01891 AC004449.1-201ENST00000564240 433 ntBASIC12.44□□□□□ -0.42
HLA-AP01891 MIR4453-201ENST00000584019 89 ntBASIC12.44□□□□□ -0.42
HLA-AP01891 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-AP01891 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.44□□□□□ -0.42
HLA-AP01891 AC006538.3-201ENST00000612495 578 ntBASIC12.44□□□□□ -0.42
HLA-AP01891 AC018529.1-201ENST00000613063 361 ntBASIC12.44□□□□□ -0.42
HLA-AP01891 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-AP01891 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
HLA-AP01891 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-AP01891 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
HLA-AP01891 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.44□□□□□ -0.42
HLA-AP01891 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
HLA-AP01891 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HLA-AP01891 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-AP01891 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HLA-AP01891 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.44□□□□□ -0.42
HLA-AP01891 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
HLA-AP01891 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 KRT8P12-202ENST00000472924 1397 ntBASIC12.43□□□□□ -0.42
HLA-AP01891 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HLA-AP01891 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-AP01891 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-AP01891 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-AP01891 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-AP01891 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-AP01891 AL157996.1-201ENST00000624684 2299 ntBASIC12.43□□□□□ -0.42
HLA-AP01891 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-AP01891 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HLA-AP01891 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HLA-AP01891 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-AP01891 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-AP01891 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-AP01891 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.43□□□□□ -0.42
HLA-AP01891 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-AP01891 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-AP01891 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-AP01891 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-AP01891 GPALPP1-207ENST00000611650 899 ntBASIC12.43□□□□□ -0.42
HLA-AP01891 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.43□□□□□ -0.42
HLA-AP01891 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 AC093028.1-201ENST00000622998 982 ntBASIC12.43□□□□□ -0.42
HLA-AP01891 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-AP01891 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
HLA-AP01891 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-AP01891 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-AP01891 Z97205.2-201ENST00000564697 1639 ntBASIC12.43□□□□□ -0.42
HLA-AP01891 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-AP01891 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-AP01891 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.43□□□□□ -0.42
HLA-AP01891 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HLA-AP01891 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.43□□□□□ -0.42
HLA-AP01891 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HLA-AP01891 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.42□□□□□ -0.42
HLA-AP01891 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
HLA-AP01891 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms