Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRBC1P01850 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBC1P01850 AC023908.3-201ENST00000564211 3047 ntBASIC14.64□□□□□ -0.07
TRBC1P01850 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRBC1P01850 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 DPM3-202ENST00000368399 517 ntBASIC14.64□□□□□ -0.07
TRBC1P01850 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 HLA-J-204ENST00000495278 958 ntBASIC14.64□□□□□ -0.07
TRBC1P01850 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.64□□□□□ -0.07
TRBC1P01850 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.64□□□□□ -0.07
TRBC1P01850 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 RN7SL163P-201ENST00000583100 276 ntBASIC14.64□□□□□ -0.07
TRBC1P01850 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.64□□□□□ -0.07
TRBC1P01850 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 AC243960.2-201ENST00000600996 747 ntBASIC14.64□□□□□ -0.07
TRBC1P01850 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 AC068587.8-201ENST00000641239 219 ntBASIC14.64□□□□□ -0.07
TRBC1P01850 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 CYP4F23P-201ENST00000593402 1579 ntBASIC14.64□□□□□ -0.07
TRBC1P01850 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.64□□□□□ -0.07
TRBC1P01850 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRBC1P01850 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBC1P01850 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBC1P01850 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRBC1P01850 AC011498.7-201ENST00000624986 2027 ntBASIC14.63□□□□□ -0.07
TRBC1P01850 FAM90A7P-201ENST00000382628 1395 ntBASIC14.63□□□□□ -0.07
TRBC1P01850 FAM90A23P-201ENST00000400136 1395 ntBASIC14.63□□□□□ -0.07
TRBC1P01850 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRBC1P01850 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 AC136759.1-202ENST00000530858 2194 ntBASIC14.63□□□□□ -0.07
TRBC1P01850 AC007191.1-201ENST00000623179 2995 ntBASIC14.63□□□□□ -0.07
TRBC1P01850 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.63□□□□□ -0.07
TRBC1P01850 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.63□□□□□ -0.07
TRBC1P01850 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.63□□□□□ -0.07
TRBC1P01850 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRBC1P01850 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.63□□□□□ -0.07
TRBC1P01850 SCARNA21-201ENST00000517026 139 ntBASIC14.63□□□□□ -0.07
TRBC1P01850 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBC1P01850 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.63□□□□□ -0.07
TRBC1P01850 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBC1P01850 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.63□□□□□ -0.07
TRBC1P01850 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBC1P01850 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 AC005586.2-201ENST00000563946 837 ntBASIC14.63□□□□□ -0.07
TRBC1P01850 AC008805.1-201ENST00000590892 364 ntBASIC14.63□□□□□ -0.07
TRBC1P01850 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRBC1P01850 AC133540.1-201ENST00000620845 1019 ntBASIC14.63□□□□□ -0.07
TRBC1P01850 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBC1P01850 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBC1P01850 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
TRBC1P01850 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.63□□□□□ -0.07
TRBC1P01850 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRBC1P01850 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.63□□□□□ -0.07
TRBC1P01850 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TRBC1P01850 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
TRBC1P01850 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRBC1P01850 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms