Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.45□□□□□ -0.1
PDGFBP01127 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.45□□□□□ -0.1
PDGFBP01127 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PDGFBP01127 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14.45□□□□□ -0.1
PDGFBP01127 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 RN7SL846P-201ENST00000467429 292 ntBASIC14.45□□□□□ -0.1
PDGFBP01127 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.45□□□□□ -0.1
PDGFBP01127 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
PDGFBP01127 AC113347.2-201ENST00000512350 279 ntBASIC14.45□□□□□ -0.1
PDGFBP01127 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC14.45□□□□□ -0.1
PDGFBP01127 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.45□□□□□ -0.1
PDGFBP01127 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.45□□□□□ -0.1
PDGFBP01127 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14.45□□□□□ -0.1
PDGFBP01127 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.45□□□□□ -0.1
PDGFBP01127 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.45□□□□□ -0.1
PDGFBP01127 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.45□□□□□ -0.1
PDGFBP01127 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFBP01127 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFBP01127 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFBP01127 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PDGFBP01127 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 CICP23-201ENST00000605013 2741 ntBASIC14.44□□□□□ -0.1
PDGFBP01127 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.44□□□□□ -0.1
PDGFBP01127 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.44□□□□□ -0.1
PDGFBP01127 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.44□□□□□ -0.1
PDGFBP01127 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFBP01127 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFBP01127 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.44□□□□□ -0.1
PDGFBP01127 AHCYP3-201ENST00000420053 1279 ntBASIC14.44□□□□□ -0.1
PDGFBP01127 AP000244.1-201ENST00000424582 201 ntBASIC14.44□□□□□ -0.1
PDGFBP01127 NRADDP-201ENST00000437305 691 ntBASIC14.44□□□□□ -0.1
PDGFBP01127 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFBP01127 RN7SL788P-201ENST00000460504 316 ntBASIC14.44□□□□□ -0.1
PDGFBP01127 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFBP01127 AC025594.1-201ENST00000469533 543 ntBASIC14.44□□□□□ -0.1
PDGFBP01127 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFBP01127 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFBP01127 MIR2278-201ENST00000516344 96 ntBASIC14.44□□□□□ -0.1
PDGFBP01127 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.44□□□□□ -0.1
PDGFBP01127 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFBP01127 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC14.44□□□□□ -0.1
PDGFBP01127 NEK4P3-201ENST00000604859 544 ntBASIC14.44□□□□□ -0.1
PDGFBP01127 AC090386.2-201ENST00000623010 1039 ntBASIC14.44□□□□□ -0.1
PDGFBP01127 AC005274.1-201ENST00000623460 802 ntBASIC14.44□□□□□ -0.1
PDGFBP01127 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PDGFBP01127 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.44□□□□□ -0.1
PDGFBP01127 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 AC046158.3-201ENST00000624947 2558 ntBASIC14.44□□□□□ -0.1
PDGFBP01127 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
PDGFBP01127 AC087481.3-201ENST00000602886 1894 ntBASIC14.44□□□□□ -0.1
PDGFBP01127 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFBP01127 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFBP01127 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PDGFBP01127 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDGFBP01127 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms