Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CTNND1O60716 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.98■□□□□ 0.31
CTNND1O60716 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CTNND1O60716 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 AC092580.1-201ENST00000433998 658 ntBASIC16.98■□□□□ 0.31
CTNND1O60716 AC012362.1-201ENST00000434906 739 ntBASIC16.98■□□□□ 0.31
CTNND1O60716 LYPLA2P1-203ENST00000447689 696 ntBASIC16.98■□□□□ 0.31
CTNND1O60716 RN7SL277P-201ENST00000481521 288 ntBASIC16.98■□□□□ 0.31
CTNND1O60716 AP003398.1-201ENST00000531124 318 ntBASIC16.98■□□□□ 0.31
CTNND1O60716 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.98■□□□□ 0.31
CTNND1O60716 NUDT4P2-201ENST00000578341 546 ntBASIC16.98■□□□□ 0.31
CTNND1O60716 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.98■□□□□ 0.31
CTNND1O60716 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.98■□□□□ 0.31
CTNND1O60716 AC107464.3-201ENST00000609172 737 ntBASIC16.98■□□□□ 0.31
CTNND1O60716 AC090386.2-201ENST00000623010 1039 ntBASIC16.98■□□□□ 0.31
CTNND1O60716 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CTNND1O60716 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.98■□□□□ 0.31
CTNND1O60716 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.98■□□□□ 0.31
CTNND1O60716 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CTNND1O60716 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CTNND1O60716 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CTNND1O60716 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.98■□□□□ 0.31
CTNND1O60716 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CTNND1O60716 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CTNND1O60716 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.98■□□□□ 0.31
CTNND1O60716 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.98■□□□□ 0.31
CTNND1O60716 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTNND1O60716 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.97■□□□□ 0.31
CTNND1O60716 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.97■□□□□ 0.31
CTNND1O60716 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.97■□□□□ 0.31
CTNND1O60716 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CTNND1O60716 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 AC073869.2-201ENST00000417338 1026 ntBASIC16.97■□□□□ 0.31
CTNND1O60716 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 RPL13AP19-201ENST00000434320 584 ntBASIC16.97■□□□□ 0.31
CTNND1O60716 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.97■□□□□ 0.31
CTNND1O60716 AP000911.2-201ENST00000534330 502 ntBASIC16.97■□□□□ 0.31
CTNND1O60716 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.97■□□□□ 0.31
CTNND1O60716 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.97■□□□□ 0.31
CTNND1O60716 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.97■□□□□ 0.31
CTNND1O60716 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CTNND1O60716 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CTNND1O60716 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CTNND1O60716 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CTNND1O60716 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.97■□□□□ 0.31
CTNND1O60716 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CTNND1O60716 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CTNND1O60716 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTNND1O60716 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CTNND1O60716 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CTNND1O60716 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.96■□□□□ 0.31
CTNND1O60716 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.96■□□□□ 0.31
CTNND1O60716 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CTNND1O60716 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 AC092638.2-201ENST00000441105 947 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms