Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.82■□□□□ 0.12
EXTL3O43909 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.82■□□□□ 0.12
EXTL3O43909 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.82■□□□□ 0.12
EXTL3O43909 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
EXTL3O43909 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.82■□□□□ 0.12
EXTL3O43909 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.82■□□□□ 0.12
EXTL3O43909 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.82■□□□□ 0.12
EXTL3O43909 AC005740.2-201ENST00000511085 419 ntBASIC15.82■□□□□ 0.12
EXTL3O43909 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.82■□□□□ 0.12
EXTL3O43909 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.82■□□□□ 0.12
EXTL3O43909 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.82■□□□□ 0.12
EXTL3O43909 SNORD3B-2-202ENST00000571722 791 ntBASIC15.82■□□□□ 0.12
EXTL3O43909 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.82■□□□□ 0.12
EXTL3O43909 AC090164.2-201ENST00000611487 516 ntBASIC15.82■□□□□ 0.12
EXTL3O43909 AL136295.7-201ENST00000619226 1200 ntBASIC15.82■□□□□ 0.12
EXTL3O43909 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
EXTL3O43909 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
EXTL3O43909 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.82■□□□□ 0.12
EXTL3O43909 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
EXTL3O43909 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.82■□□□□ 0.12
EXTL3O43909 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
EXTL3O43909 AC152010.1-201ENST00000415779 2006 ntBASIC15.82■□□□□ 0.12
EXTL3O43909 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
EXTL3O43909 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EXTL3O43909 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.81■□□□□ 0.12
EXTL3O43909 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
EXTL3O43909 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
EXTL3O43909 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.81■□□□□ 0.12
EXTL3O43909 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.81■□□□□ 0.12
EXTL3O43909 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
EXTL3O43909 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
EXTL3O43909 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.81■□□□□ 0.12
EXTL3O43909 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.81■□□□□ 0.12
EXTL3O43909 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
EXTL3O43909 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
EXTL3O43909 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.81■□□□□ 0.12
EXTL3O43909 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.81■□□□□ 0.12
EXTL3O43909 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.81■□□□□ 0.12
EXTL3O43909 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.81■□□□□ 0.12
EXTL3O43909 NKAIN1P1-201ENST00000435754 582 ntBASIC15.81■□□□□ 0.12
EXTL3O43909 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.81■□□□□ 0.12
EXTL3O43909 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.81■□□□□ 0.12
EXTL3O43909 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
EXTL3O43909 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.81■□□□□ 0.12
EXTL3O43909 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 AC044849.1-201ENST00000519737 1188 ntBASIC15.81■□□□□ 0.12
EXTL3O43909 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.81■□□□□ 0.12
EXTL3O43909 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.81■□□□□ 0.12
EXTL3O43909 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.81■□□□□ 0.12
EXTL3O43909 AC124068.2-201ENST00000569473 1109 ntBASIC15.81■□□□□ 0.12
EXTL3O43909 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.81■□□□□ 0.12
EXTL3O43909 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.81■□□□□ 0.12
EXTL3O43909 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 AC020910.6-201ENST00000623084 1459 ntBASIC15.81■□□□□ 0.12
EXTL3O43909 AC026748.1-201ENST00000624349 3251 ntBASIC15.81■□□□□ 0.12
EXTL3O43909 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EXTL3O43909 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EXTL3O43909 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.8■□□□□ 0.12
EXTL3O43909 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EXTL3O43909 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
EXTL3O43909 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.8■□□□□ 0.12
EXTL3O43909 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EXTL3O43909 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
EXTL3O43909 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EXTL3O43909 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EXTL3O43909 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms