Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 TCAM1P-207ENST00000485295 1537 ntBASIC11.04□□□□□ -0.64
SNAI2O43623 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.04□□□□□ -0.64
SNAI2O43623 AL445209.1-201ENST00000607269 3491 ntBASIC11.04□□□□□ -0.64
SNAI2O43623 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SNAI2O43623 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
SNAI2O43623 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 AC004241.5-201ENST00000623870 2448 ntBASIC11.04□□□□□ -0.64
SNAI2O43623 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 STOM-202ENST00000347359 870 ntTSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.04□□□□□ -0.64
SNAI2O43623 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.04□□□□□ -0.64
SNAI2O43623 SPDYE7P-202ENST00000420373 878 ntBASIC11.04□□□□□ -0.64
SNAI2O43623 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
SNAI2O43623 CEND1P1-201ENST00000451006 455 ntBASIC11.04□□□□□ -0.64
SNAI2O43623 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.04□□□□□ -0.64
SNAI2O43623 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.04□□□□□ -0.64
SNAI2O43623 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.04□□□□□ -0.64
SNAI2O43623 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.04□□□□□ -0.64
SNAI2O43623 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.04□□□□□ -0.64
SNAI2O43623 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.04□□□□□ -0.64
SNAI2O43623 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.04□□□□□ -0.64
SNAI2O43623 AC093520.2-201ENST00000561830 333 ntBASIC11.04□□□□□ -0.64
SNAI2O43623 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.04□□□□□ -0.64
SNAI2O43623 MIR4453-201ENST00000584019 89 ntBASIC11.04□□□□□ -0.64
SNAI2O43623 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.04□□□□□ -0.64
SNAI2O43623 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SNAI2O43623 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.04□□□□□ -0.64
SNAI2O43623 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.04□□□□□ -0.64
SNAI2O43623 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SNAI2O43623 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SNAI2O43623 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SNAI2O43623 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.03□□□□□ -0.64
SNAI2O43623 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SNAI2O43623 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.03□□□□□ -0.64
SNAI2O43623 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SNAI2O43623 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC11.03□□□□□ -0.64
SNAI2O43623 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.03□□□□□ -0.64
SNAI2O43623 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SNAI2O43623 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.03□□□□□ -0.64
SNAI2O43623 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms