Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.77□□□□□ -0.53
UPK2O00526 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.77□□□□□ -0.53
UPK2O00526 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.77□□□□□ -0.53
UPK2O00526 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.77□□□□□ -0.53
UPK2O00526 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
UPK2O00526 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.77□□□□□ -0.53
UPK2O00526 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.77□□□□□ -0.53
UPK2O00526 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
UPK2O00526 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.77□□□□□ -0.53
UPK2O00526 TUBB8P4-201ENST00000511806 1324 ntBASIC11.77□□□□□ -0.53
UPK2O00526 PEG13-201ENST00000631594 5667 ntBASIC11.77□□□□□ -0.53
UPK2O00526 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.77□□□□□ -0.53
UPK2O00526 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.77□□□□□ -0.53
UPK2O00526 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UPK2O00526 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
UPK2O00526 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UPK2O00526 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 AC089987.1-201ENST00000551654 2209 ntBASIC11.76□□□□□ -0.53
UPK2O00526 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.76□□□□□ -0.53
UPK2O00526 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
UPK2O00526 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UPK2O00526 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UPK2O00526 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UPK2O00526 AC009093.2-202ENST00000620513 2079 ntBASIC11.76□□□□□ -0.53
UPK2O00526 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC11.76□□□□□ -0.53
UPK2O00526 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 AC011495.1-201ENST00000498085 584 ntBASIC11.76□□□□□ -0.53
UPK2O00526 CDC23-208ENST00000505120 455 ntTSL 3 BASIC11.76□□□□□ -0.53
UPK2O00526 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.76□□□□□ -0.53
UPK2O00526 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 AC027237.1-201ENST00000560942 655 ntBASIC11.76□□□□□ -0.53
UPK2O00526 SPCS2P1-201ENST00000561636 679 ntBASIC11.76□□□□□ -0.53
UPK2O00526 AC106820.3-201ENST00000561653 397 ntBASIC11.76□□□□□ -0.53
UPK2O00526 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.76□□□□□ -0.53
UPK2O00526 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 AC010319.3-201ENST00000597028 470 ntBASIC11.76□□□□□ -0.53
UPK2O00526 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.76□□□□□ -0.53
UPK2O00526 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.76□□□□□ -0.53
UPK2O00526 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.76□□□□□ -0.53
UPK2O00526 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
UPK2O00526 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
UPK2O00526 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
UPK2O00526 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms