Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL3A8MV65 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL3A8MV65 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL3A8MV65 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
VGLL3A8MV65 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL3A8MV65 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL3A8MV65 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC14.37□□□□□ -0.11
VGLL3A8MV65 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 ANKEF1-202ENST00000378392 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 LINC02080-201ENST00000585863 3085 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 SLC2A4-201ENST00000317370 3426 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 DIRAS1-201ENST00000323469 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 TLE4-201ENST00000265284 2382 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 AC004870.1-201ENST00000315132 882 ntBASIC14.36□□□□□ -0.11
VGLL3A8MV65 NUS1P2-201ENST00000417358 873 ntBASIC14.36□□□□□ -0.11
VGLL3A8MV65 AC096633.1-201ENST00000422446 749 ntBASIC14.36□□□□□ -0.11
VGLL3A8MV65 AC136604.1-202ENST00000425471 771 ntBASIC14.36□□□□□ -0.11
VGLL3A8MV65 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 RN7SL510P-201ENST00000581311 263 ntBASIC14.36□□□□□ -0.11
VGLL3A8MV65 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 CYP1A1-209ENST00000612821 2402 ntTSL 5 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 DDR1-232ENST00000418800 3588 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 PITX2-213ENST00000616641 3102 ntTSL 5 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL3A8MV65 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.36□□□□□ -0.11
VGLL3A8MV65 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 RNF6-203ENST00000381588 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 ACAA2-201ENST00000285093 3350 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 AF067845.2-201ENST00000617093 3049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VGLL3A8MV65 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 UNC93B7-201ENST00000509439 705 ntBASIC14.35□□□□□ -0.11
VGLL3A8MV65 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 MIR5100-201ENST00000579544 119 ntBASIC14.35□□□□□ -0.11
VGLL3A8MV65 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.35□□□□□ -0.11
VGLL3A8MV65 C8B-206ENST00000543257 2382 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms