Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 TMBIM7P-202ENST00000641474 1516 ntBASIC14.24□□□□□ -0.13
C4orf47A7E2U8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 TMBIM7P-203ENST00000641617 1718 ntBASIC14.24□□□□□ -0.13
C4orf47A7E2U8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
C4orf47A7E2U8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 C18orf15-201ENST00000623680 2534 ntBASIC14.23□□□□□ -0.13
C4orf47A7E2U8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 REXO1L2P-201ENST00000425429 2069 ntBASIC14.23□□□□□ -0.13
C4orf47A7E2U8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 PGAM1P12-201ENST00000505622 748 ntBASIC14.23□□□□□ -0.13
C4orf47A7E2U8 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 AL022334.2-201ENST00000610000 484 ntBASIC14.23□□□□□ -0.13
C4orf47A7E2U8 HMGB1P24-201ENST00000611897 328 ntBASIC14.23□□□□□ -0.13
C4orf47A7E2U8 AC021305.1-201ENST00000520656 1514 ntBASIC14.23□□□□□ -0.13
C4orf47A7E2U8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 AC063926.3-201ENST00000624734 5658 ntBASIC14.23□□□□□ -0.13
C4orf47A7E2U8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.23□□□□□ -0.13
C4orf47A7E2U8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 AC023157.3-201ENST00000619086 2088 ntBASIC14.22□□□□□ -0.13
C4orf47A7E2U8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.22□□□□□ -0.13
C4orf47A7E2U8 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 AC244197.1-201ENST00000456494 951 ntBASIC14.22□□□□□ -0.13
C4orf47A7E2U8 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 GCOM2-201ENST00000509133 1104 ntBASIC14.22□□□□□ -0.13
C4orf47A7E2U8 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 AP005212.2-201ENST00000584979 510 ntBASIC14.22□□□□□ -0.13
C4orf47A7E2U8 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 MME-218ENST00000625667 363 ntTSL 5 BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 AC007326.2-201ENST00000624224 7579 ntBASIC14.22□□□□□ -0.13
C4orf47A7E2U8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
C4orf47A7E2U8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms