Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SPDYE12P-201ENST00000618416 771 ntBASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TRAV18A0A075B6X5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 AL445209.1-201ENST00000607269 3491 ntBASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 NUS1P3-201ENST00000423502 862 ntBASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 AC007969.1-201ENST00000433675 447 ntBASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 AC023141.5-201ENST00000458585 616 ntBASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 AP000344.2-201ENST00000512987 629 ntBASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 MIR4469-201ENST00000583919 79 ntBASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 AC107373.2-201ENST00000607735 490 ntBASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 AL138828.2-201ENST00000615812 383 ntBASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 AL158212.4-201ENST00000624062 1286 ntBASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV18A0A075B6X5 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV18A0A075B6X5 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV18A0A075B6X5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRAV18A0A075B6X5 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.65□□□□□ -0.39
TRAV18A0A075B6X5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 MRPL37P1-201ENST00000592451 1337 ntBASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.64□□□□□ -0.39
TRAV18A0A075B6X5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms